Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Rc3h1Q4VGL6 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC23.52■■□□□ 1.36
Rc3h1Q4VGL6 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Rc3h1Q4VGL6 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Rc3h1Q4VGL6 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Rc3h1Q4VGL6 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Rc3h1Q4VGL6 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.35
Rc3h1Q4VGL6 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Rc3h1Q4VGL6 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Rc3h1Q4VGL6 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC23.51■■□□□ 1.35
Rc3h1Q4VGL6 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Rc3h1Q4VGL6 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Rc3h1Q4VGL6 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Rc3h1Q4VGL6 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Rc3h1Q4VGL6 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Rc3h1Q4VGL6 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Rc3h1Q4VGL6 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Rc3h1Q4VGL6 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC23.5■■□□□ 1.35
Rc3h1Q4VGL6 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Rc3h1Q4VGL6 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Rc3h1Q4VGL6 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Rc3h1Q4VGL6 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Rc3h1Q4VGL6 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC23.49■■□□□ 1.35
Rc3h1Q4VGL6 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Rc3h1Q4VGL6 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Rc3h1Q4VGL6 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC23.49■■□□□ 1.35
Rc3h1Q4VGL6 Flvcr1-202ENSMUST00000191946 1216 ntBASIC23.49■■□□□ 1.35
Rc3h1Q4VGL6 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Rc3h1Q4VGL6 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Rc3h1Q4VGL6 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC23.49■■□□□ 1.35
Rc3h1Q4VGL6 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC23.48■■□□□ 1.35
Rc3h1Q4VGL6 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Rc3h1Q4VGL6 Spcs1-204ENSMUST00000226782 949 ntBASIC23.48■■□□□ 1.35
Rc3h1Q4VGL6 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Rc3h1Q4VGL6 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Rc3h1Q4VGL6 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC23.48■■□□□ 1.35
Rc3h1Q4VGL6 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Rc3h1Q4VGL6 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Rc3h1Q4VGL6 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC23.47■■□□□ 1.35
Rc3h1Q4VGL6 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Rc3h1Q4VGL6 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Rc3h1Q4VGL6 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
Rc3h1Q4VGL6 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Rc3h1Q4VGL6 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Rc3h1Q4VGL6 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Rc3h1Q4VGL6 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC23.46■■□□□ 1.35
Rc3h1Q4VGL6 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC23.46■■□□□ 1.35
Rc3h1Q4VGL6 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Rc3h1Q4VGL6 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Rc3h1Q4VGL6 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Rc3h1Q4VGL6 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
Rc3h1Q4VGL6 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
Rc3h1Q4VGL6 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
Rc3h1Q4VGL6 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Rc3h1Q4VGL6 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
Rc3h1Q4VGL6 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
Rc3h1Q4VGL6 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Rc3h1Q4VGL6 Gm21168-201ENSMUST00000199646 1096 ntBASIC23.45■■□□□ 1.34
Rc3h1Q4VGL6 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC23.45■■□□□ 1.34
Rc3h1Q4VGL6 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
Rc3h1Q4VGL6 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC23.45■■□□□ 1.34
Rc3h1Q4VGL6 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
Rc3h1Q4VGL6 Gm27045-201ENSMUST00000182145 1402 ntBASIC23.44■■□□□ 1.34
Rc3h1Q4VGL6 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
Rc3h1Q4VGL6 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC23.44■■□□□ 1.34
Rc3h1Q4VGL6 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
Rc3h1Q4VGL6 Gm7160-202ENSMUST00000188519 1027 ntBASIC23.44■■□□□ 1.34
Rc3h1Q4VGL6 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Rc3h1Q4VGL6 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC23.44■■□□□ 1.34
Rc3h1Q4VGL6 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Rc3h1Q4VGL6 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Rc3h1Q4VGL6 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Rc3h1Q4VGL6 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC23.44■■□□□ 1.34
Rc3h1Q4VGL6 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
Rc3h1Q4VGL6 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
Rc3h1Q4VGL6 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Rc3h1Q4VGL6 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Rc3h1Q4VGL6 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC23.43■■□□□ 1.34
Rc3h1Q4VGL6 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC23.43■■□□□ 1.34
Rc3h1Q4VGL6 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
Rc3h1Q4VGL6 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Rc3h1Q4VGL6 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC23.43■■□□□ 1.34
Rc3h1Q4VGL6 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Rc3h1Q4VGL6 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC23.43■■□□□ 1.34
Rc3h1Q4VGL6 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Rc3h1Q4VGL6 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Rc3h1Q4VGL6 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Rc3h1Q4VGL6 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Rc3h1Q4VGL6 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Rc3h1Q4VGL6 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC23.42■■□□□ 1.34
Rc3h1Q4VGL6 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Rc3h1Q4VGL6 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC23.42■■□□□ 1.34
Rc3h1Q4VGL6 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Rc3h1Q4VGL6 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Rc3h1Q4VGL6 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Rc3h1Q4VGL6 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Rc3h1Q4VGL6 Gm10209-201ENSMUST00000203397 1607 ntBASIC23.41■■□□□ 1.34
Rc3h1Q4VGL6 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Rc3h1Q4VGL6 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Rc3h1Q4VGL6 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms