Protein–RNA interactions for Protein: Q3UWL8

Pfdn4, Prefoldin subunit 4, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn4Q3UWL8 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Pfdn4Q3UWL8 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pfdn4Q3UWL8 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pfdn4Q3UWL8 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pfdn4Q3UWL8 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Pfdn4Q3UWL8 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pfdn4Q3UWL8 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.7■□□□□ 0.74
Pfdn4Q3UWL8 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.7■□□□□ 0.74
Pfdn4Q3UWL8 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
Pfdn4Q3UWL8 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pfdn4Q3UWL8 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Pfdn4Q3UWL8 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Pfdn4Q3UWL8 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Pfdn4Q3UWL8 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pfdn4Q3UWL8 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pfdn4Q3UWL8 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pfdn4Q3UWL8 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pfdn4Q3UWL8 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pfdn4Q3UWL8 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pfdn4Q3UWL8 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pfdn4Q3UWL8 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pfdn4Q3UWL8 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Pfdn4Q3UWL8 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pfdn4Q3UWL8 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.69■□□□□ 0.74
Pfdn4Q3UWL8 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pfdn4Q3UWL8 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pfdn4Q3UWL8 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pfdn4Q3UWL8 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Pfdn4Q3UWL8 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.69■□□□□ 0.74
Pfdn4Q3UWL8 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pfdn4Q3UWL8 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pfdn4Q3UWL8 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pfdn4Q3UWL8 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pfdn4Q3UWL8 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pfdn4Q3UWL8 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Pfdn4Q3UWL8 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pfdn4Q3UWL8 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Pfdn4Q3UWL8 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pfdn4Q3UWL8 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Pfdn4Q3UWL8 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Pfdn4Q3UWL8 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.67■□□□□ 0.74
Pfdn4Q3UWL8 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Pfdn4Q3UWL8 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Pfdn4Q3UWL8 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC19.67■□□□□ 0.74
Pfdn4Q3UWL8 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Pfdn4Q3UWL8 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Pfdn4Q3UWL8 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pfdn4Q3UWL8 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pfdn4Q3UWL8 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.66■□□□□ 0.74
Pfdn4Q3UWL8 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Pfdn4Q3UWL8 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pfdn4Q3UWL8 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Pfdn4Q3UWL8 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Pfdn4Q3UWL8 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.66■□□□□ 0.74
Pfdn4Q3UWL8 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Pfdn4Q3UWL8 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pfdn4Q3UWL8 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Pfdn4Q3UWL8 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Pfdn4Q3UWL8 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.65■□□□□ 0.74
Pfdn4Q3UWL8 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pfdn4Q3UWL8 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pfdn4Q3UWL8 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pfdn4Q3UWL8 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pfdn4Q3UWL8 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Pfdn4Q3UWL8 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pfdn4Q3UWL8 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pfdn4Q3UWL8 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pfdn4Q3UWL8 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pfdn4Q3UWL8 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pfdn4Q3UWL8 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pfdn4Q3UWL8 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Pfdn4Q3UWL8 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pfdn4Q3UWL8 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pfdn4Q3UWL8 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Pfdn4Q3UWL8 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pfdn4Q3UWL8 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pfdn4Q3UWL8 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Pfdn4Q3UWL8 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pfdn4Q3UWL8 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pfdn4Q3UWL8 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Pfdn4Q3UWL8 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Pfdn4Q3UWL8 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.63■□□□□ 0.73
Pfdn4Q3UWL8 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pfdn4Q3UWL8 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pfdn4Q3UWL8 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Pfdn4Q3UWL8 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.62■□□□□ 0.73
Pfdn4Q3UWL8 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pfdn4Q3UWL8 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.61■□□□□ 0.73
Pfdn4Q3UWL8 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pfdn4Q3UWL8 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pfdn4Q3UWL8 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pfdn4Q3UWL8 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pfdn4Q3UWL8 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pfdn4Q3UWL8 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pfdn4Q3UWL8 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pfdn4Q3UWL8 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.61■□□□□ 0.73
Pfdn4Q3UWL8 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pfdn4Q3UWL8 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Pfdn4Q3UWL8 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Pfdn4Q3UWL8 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.6■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms