Protein–RNA interactions for Protein: Q3UHJ8

Rnf44, RING finger protein 44, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf44Q3UHJ8 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf44Q3UHJ8 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf44Q3UHJ8 Gm43530-201ENSMUST00000195920 274 ntBASIC19.55■□□□□ 0.72
Rnf44Q3UHJ8 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.55■□□□□ 0.72
Rnf44Q3UHJ8 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf44Q3UHJ8 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rnf44Q3UHJ8 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf44Q3UHJ8 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf44Q3UHJ8 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf44Q3UHJ8 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf44Q3UHJ8 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf44Q3UHJ8 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.54■□□□□ 0.72
Rnf44Q3UHJ8 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rnf44Q3UHJ8 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rnf44Q3UHJ8 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rnf44Q3UHJ8 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Rnf44Q3UHJ8 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
Rnf44Q3UHJ8 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rnf44Q3UHJ8 Gm13241-201ENSMUST00000094493 780 ntBASIC19.53■□□□□ 0.72
Rnf44Q3UHJ8 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rnf44Q3UHJ8 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rnf44Q3UHJ8 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rnf44Q3UHJ8 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rnf44Q3UHJ8 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rnf44Q3UHJ8 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Rnf44Q3UHJ8 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
Rnf44Q3UHJ8 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Rnf44Q3UHJ8 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Rnf44Q3UHJ8 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Rnf44Q3UHJ8 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Rnf44Q3UHJ8 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
Rnf44Q3UHJ8 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.51■□□□□ 0.71
Rnf44Q3UHJ8 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf44Q3UHJ8 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf44Q3UHJ8 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf44Q3UHJ8 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.51■□□□□ 0.71
Rnf44Q3UHJ8 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf44Q3UHJ8 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
Rnf44Q3UHJ8 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf44Q3UHJ8 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf44Q3UHJ8 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf44Q3UHJ8 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Rnf44Q3UHJ8 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rnf44Q3UHJ8 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Rnf44Q3UHJ8 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Rnf44Q3UHJ8 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Rnf44Q3UHJ8 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Rnf44Q3UHJ8 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Rnf44Q3UHJ8 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf44Q3UHJ8 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf44Q3UHJ8 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf44Q3UHJ8 Gm21956-201ENSMUST00000179946 522 ntBASIC19.49■□□□□ 0.71
Rnf44Q3UHJ8 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf44Q3UHJ8 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf44Q3UHJ8 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.49■□□□□ 0.71
Rnf44Q3UHJ8 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Rnf44Q3UHJ8 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
Rnf44Q3UHJ8 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC19.48■□□□□ 0.71
Rnf44Q3UHJ8 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf44Q3UHJ8 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf44Q3UHJ8 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf44Q3UHJ8 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Rnf44Q3UHJ8 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf44Q3UHJ8 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf44Q3UHJ8 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf44Q3UHJ8 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.48■□□□□ 0.71
Rnf44Q3UHJ8 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf44Q3UHJ8 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf44Q3UHJ8 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.48■□□□□ 0.71
Rnf44Q3UHJ8 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf44Q3UHJ8 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf44Q3UHJ8 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rnf44Q3UHJ8 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf44Q3UHJ8 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Rnf44Q3UHJ8 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf44Q3UHJ8 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.47■□□□□ 0.71
Rnf44Q3UHJ8 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf44Q3UHJ8 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Rnf44Q3UHJ8 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf44Q3UHJ8 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Rnf44Q3UHJ8 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.46■□□□□ 0.71
Rnf44Q3UHJ8 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf44Q3UHJ8 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.46■□□□□ 0.71
Rnf44Q3UHJ8 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.46■□□□□ 0.71
Rnf44Q3UHJ8 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.46■□□□□ 0.71
Rnf44Q3UHJ8 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Rnf44Q3UHJ8 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf44Q3UHJ8 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rnf44Q3UHJ8 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf44Q3UHJ8 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.45■□□□□ 0.7
Rnf44Q3UHJ8 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf44Q3UHJ8 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.45■□□□□ 0.7
Rnf44Q3UHJ8 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf44Q3UHJ8 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf44Q3UHJ8 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf44Q3UHJ8 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf44Q3UHJ8 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.45■□□□□ 0.7
Rnf44Q3UHJ8 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rnf44Q3UHJ8 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.44■□□□□ 0.7
Rnf44Q3UHJ8 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms