Protein–RNA interactions for Protein: Q3U466

Cln6, Ceroid-lipofuscinosis, neuronal 6, mousemouse

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6Q3U466 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Cln6Q3U466 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC17.17■□□□□ 0.34
Cln6Q3U466 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
Cln6Q3U466 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cln6Q3U466 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Cln6Q3U466 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cln6Q3U466 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cln6Q3U466 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cln6Q3U466 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cln6Q3U466 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cln6Q3U466 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cln6Q3U466 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cln6Q3U466 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cln6Q3U466 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cln6Q3U466 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cln6Q3U466 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cln6Q3U466 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cln6Q3U466 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cln6Q3U466 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cln6Q3U466 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cln6Q3U466 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cln6Q3U466 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cln6Q3U466 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
Cln6Q3U466 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cln6Q3U466 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC17.15■□□□□ 0.34
Cln6Q3U466 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cln6Q3U466 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.15■□□□□ 0.34
Cln6Q3U466 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cln6Q3U466 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cln6Q3U466 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cln6Q3U466 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cln6Q3U466 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cln6Q3U466 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cln6Q3U466 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC17.14■□□□□ 0.33
Cln6Q3U466 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC17.14■□□□□ 0.33
Cln6Q3U466 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cln6Q3U466 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cln6Q3U466 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Cln6Q3U466 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cln6Q3U466 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cln6Q3U466 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Cln6Q3U466 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cln6Q3U466 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Cln6Q3U466 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cln6Q3U466 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cln6Q3U466 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cln6Q3U466 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cln6Q3U466 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Cln6Q3U466 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cln6Q3U466 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Cln6Q3U466 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cln6Q3U466 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cln6Q3U466 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Cln6Q3U466 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cln6Q3U466 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cln6Q3U466 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cln6Q3U466 Gm5067-201ENSMUST00000170449 1009 ntBASIC17.12■□□□□ 0.33
Cln6Q3U466 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cln6Q3U466 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cln6Q3U466 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cln6Q3U466 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cln6Q3U466 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cln6Q3U466 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.11■□□□□ 0.33
Cln6Q3U466 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cln6Q3U466 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cln6Q3U466 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cln6Q3U466 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Cln6Q3U466 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cln6Q3U466 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cln6Q3U466 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cln6Q3U466 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cln6Q3U466 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC17.11■□□□□ 0.33
Cln6Q3U466 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cln6Q3U466 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Cln6Q3U466 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cln6Q3U466 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cln6Q3U466 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Cln6Q3U466 Gm8093-201ENSMUST00000128935 1892 ntBASIC17.1■□□□□ 0.33
Cln6Q3U466 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cln6Q3U466 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cln6Q3U466 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cln6Q3U466 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.1■□□□□ 0.33
Cln6Q3U466 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cln6Q3U466 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cln6Q3U466 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cln6Q3U466 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cln6Q3U466 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cln6Q3U466 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cln6Q3U466 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Cln6Q3U466 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cln6Q3U466 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cln6Q3U466 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cln6Q3U466 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cln6Q3U466 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Cln6Q3U466 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.09■□□□□ 0.33
Cln6Q3U466 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cln6Q3U466 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cln6Q3U466 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Cln6Q3U466 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Cln6Q3U466 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms