Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Smn1P97801 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.31■□□□□ 0.36
Smn1P97801 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.31■□□□□ 0.36
Smn1P97801 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Smn1P97801 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Smn1P97801 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smn1P97801 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smn1P97801 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.3■□□□□ 0.36
Smn1P97801 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Smn1P97801 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smn1P97801 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smn1P97801 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smn1P97801 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Smn1P97801 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smn1P97801 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.3■□□□□ 0.36
Smn1P97801 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smn1P97801 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Smn1P97801 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Smn1P97801 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smn1P97801 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smn1P97801 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smn1P97801 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smn1P97801 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Smn1P97801 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC17.29■□□□□ 0.36
Smn1P97801 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smn1P97801 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smn1P97801 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smn1P97801 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smn1P97801 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC17.28■□□□□ 0.36
Smn1P97801 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smn1P97801 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Smn1P97801 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smn1P97801 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smn1P97801 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Smn1P97801 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Smn1P97801 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smn1P97801 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smn1P97801 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Smn1P97801 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17.27■□□□□ 0.36
Smn1P97801 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smn1P97801 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Smn1P97801 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Smn1P97801 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Smn1P97801 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.27■□□□□ 0.35
Smn1P97801 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smn1P97801 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smn1P97801 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smn1P97801 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smn1P97801 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC17.26■□□□□ 0.35
Smn1P97801 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smn1P97801 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smn1P97801 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
Smn1P97801 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smn1P97801 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Smn1P97801 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smn1P97801 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smn1P97801 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Smn1P97801 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC17.25■□□□□ 0.35
Smn1P97801 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smn1P97801 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Smn1P97801 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Smn1P97801 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Smn1P97801 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC17.24■□□□□ 0.35
Smn1P97801 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smn1P97801 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Smn1P97801 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smn1P97801 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smn1P97801 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smn1P97801 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smn1P97801 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Smn1P97801 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC17.24■□□□□ 0.35
Smn1P97801 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Smn1P97801 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Smn1P97801 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Smn1P97801 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.24■□□□□ 0.35
Smn1P97801 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Smn1P97801 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Smn1P97801 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smn1P97801 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.23■□□□□ 0.35
Smn1P97801 Gm10420-201ENSMUST00000121713 882 ntBASIC17.23■□□□□ 0.35
Smn1P97801 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC17.23■□□□□ 0.35
Smn1P97801 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Smn1P97801 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smn1P97801 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Smn1P97801 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Smn1P97801 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Smn1P97801 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smn1P97801 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Smn1P97801 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Smn1P97801 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smn1P97801 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Smn1P97801 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smn1P97801 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smn1P97801 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smn1P97801 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smn1P97801 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Smn1P97801 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Smn1P97801 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Smn1P97801 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Smn1P97801 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms