Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Nkx3-1P97436 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.52■□□□□ 0.39
Nkx3-1P97436 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Nkx3-1P97436 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Nkx3-1P97436 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.51■□□□□ 0.39
Nkx3-1P97436 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx3-1P97436 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx3-1P97436 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
Nkx3-1P97436 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx3-1P97436 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Nkx3-1P97436 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx3-1P97436 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Nkx3-1P97436 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Nkx3-1P97436 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx3-1P97436 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx3-1P97436 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx3-1P97436 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx3-1P97436 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx3-1P97436 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Nkx3-1P97436 Gm43060-201ENSMUST00000200621 289 ntBASIC17.5■□□□□ 0.39
Nkx3-1P97436 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx3-1P97436 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx3-1P97436 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx3-1P97436 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Nkx3-1P97436 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx3-1P97436 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Nkx3-1P97436 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx3-1P97436 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx3-1P97436 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx3-1P97436 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.49■□□□□ 0.39
Nkx3-1P97436 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.49■□□□□ 0.39
Nkx3-1P97436 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.49■□□□□ 0.39
Nkx3-1P97436 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx3-1P97436 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC17.49■□□□□ 0.39
Nkx3-1P97436 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC17.49■□□□□ 0.39
Nkx3-1P97436 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx3-1P97436 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Nkx3-1P97436 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx3-1P97436 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Nkx3-1P97436 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx3-1P97436 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx3-1P97436 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Nkx3-1P97436 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx3-1P97436 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx3-1P97436 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx3-1P97436 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx3-1P97436 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx3-1P97436 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx3-1P97436 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx3-1P97436 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx3-1P97436 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Nkx3-1P97436 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Nkx3-1P97436 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx3-1P97436 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Nkx3-1P97436 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx3-1P97436 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx3-1P97436 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx3-1P97436 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.47■□□□□ 0.39
Nkx3-1P97436 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx3-1P97436 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nkx3-1P97436 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.47■□□□□ 0.39
Nkx3-1P97436 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC17.46■□□□□ 0.39
Nkx3-1P97436 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx3-1P97436 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Nkx3-1P97436 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx3-1P97436 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nkx3-1P97436 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.46■□□□□ 0.39
Nkx3-1P97436 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx3-1P97436 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx3-1P97436 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx3-1P97436 Gm40848-201ENSMUST00000221998 324 ntBASIC17.45■□□□□ 0.38
Nkx3-1P97436 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx3-1P97436 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx3-1P97436 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nkx3-1P97436 Dmtn-209ENSMUST00000228295 2572 ntBASIC17.44■□□□□ 0.38
Nkx3-1P97436 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx3-1P97436 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx3-1P97436 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx3-1P97436 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.44■□□□□ 0.38
Nkx3-1P97436 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx3-1P97436 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx3-1P97436 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx3-1P97436 Gm10493-201ENSMUST00000097270 612 ntBASIC17.44■□□□□ 0.38
Nkx3-1P97436 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx3-1P97436 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nkx3-1P97436 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Nkx3-1P97436 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx3-1P97436 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx3-1P97436 Gm29257-201ENSMUST00000186115 639 ntBASIC17.43■□□□□ 0.38
Nkx3-1P97436 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx3-1P97436 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nkx3-1P97436 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Nkx3-1P97436 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Nkx3-1P97436 Gm26766-202ENSMUST00000227544 2347 ntBASIC17.43■□□□□ 0.38
Nkx3-1P97436 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.43■□□□□ 0.38
Nkx3-1P97436 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx3-1P97436 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.42■□□□□ 0.38
Nkx3-1P97436 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Nkx3-1P97436 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.42■□□□□ 0.38
Nkx3-1P97436 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms