Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC25.95■■□□□ 1.74
Nkx2-3P97334 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC25.94■■□□□ 1.74
Nkx2-3P97334 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Nkx2-3P97334 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC25.94■■□□□ 1.74
Nkx2-3P97334 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Nkx2-3P97334 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Nkx2-3P97334 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Nkx2-3P97334 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Nkx2-3P97334 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
Nkx2-3P97334 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
Nkx2-3P97334 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Nkx2-3P97334 Gm7291-201ENSMUST00000199147 382 ntBASIC25.93■■□□□ 1.74
Nkx2-3P97334 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC25.93■■□□□ 1.74
Nkx2-3P97334 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC25.92■■□□□ 1.74
Nkx2-3P97334 Gm10129-202ENSMUST00000193100 1316 ntBASIC25.92■■□□□ 1.74
Nkx2-3P97334 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Nkx2-3P97334 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC25.92■■□□□ 1.74
Nkx2-3P97334 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC25.92■■□□□ 1.74
Nkx2-3P97334 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Nkx2-3P97334 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Nkx2-3P97334 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Nkx2-3P97334 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC25.91■■□□□ 1.74
Nkx2-3P97334 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC25.91■■□□□ 1.74
Nkx2-3P97334 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC25.91■■□□□ 1.74
Nkx2-3P97334 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Nkx2-3P97334 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC25.9■■□□□ 1.74
Nkx2-3P97334 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC25.9■■□□□ 1.74
Nkx2-3P97334 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Nkx2-3P97334 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Nkx2-3P97334 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC25.9■■□□□ 1.74
Nkx2-3P97334 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Nkx2-3P97334 Gm44949-201ENSMUST00000206423 1450 ntBASIC25.9■■□□□ 1.74
Nkx2-3P97334 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Nkx2-3P97334 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.74
Nkx2-3P97334 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC25.89■■□□□ 1.74
Nkx2-3P97334 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC25.89■■□□□ 1.74
Nkx2-3P97334 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Nkx2-3P97334 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Nkx2-3P97334 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Nkx2-3P97334 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Nkx2-3P97334 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Nkx2-3P97334 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC25.88■■□□□ 1.73
Nkx2-3P97334 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC25.88■■□□□ 1.73
Nkx2-3P97334 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
Nkx2-3P97334 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC25.88■■□□□ 1.73
Nkx2-3P97334 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Nkx2-3P97334 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Nkx2-3P97334 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Nkx2-3P97334 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Nkx2-3P97334 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC25.87■■□□□ 1.73
Nkx2-3P97334 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Nkx2-3P97334 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Nkx2-3P97334 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC25.87■■□□□ 1.73
Nkx2-3P97334 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Nkx2-3P97334 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Nkx2-3P97334 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Nkx2-3P97334 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC25.86■■□□□ 1.73
Nkx2-3P97334 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC25.86■■□□□ 1.73
Nkx2-3P97334 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Nkx2-3P97334 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Nkx2-3P97334 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC25.85■■□□□ 1.73
Nkx2-3P97334 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Nkx2-3P97334 AC099934.2-201ENSMUST00000196389 70 ntBASIC25.85■■□□□ 1.73
Nkx2-3P97334 AC156953.1-201ENSMUST00000196953 70 ntBASIC25.85■■□□□ 1.73
Nkx2-3P97334 AC157822.2-201ENSMUST00000200291 70 ntBASIC25.85■■□□□ 1.73
Nkx2-3P97334 Gm42642-201ENSMUST00000200683 355 ntBASIC25.85■■□□□ 1.73
Nkx2-3P97334 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC25.85■■□□□ 1.73
Nkx2-3P97334 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Nkx2-3P97334 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Nkx2-3P97334 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Nkx2-3P97334 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC25.84■■□□□ 1.73
Nkx2-3P97334 Gm5913-201ENSMUST00000119397 1399 ntBASIC25.84■■□□□ 1.73
Nkx2-3P97334 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Nkx2-3P97334 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Nkx2-3P97334 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Nkx2-3P97334 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC25.83■■□□□ 1.73
Nkx2-3P97334 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
Nkx2-3P97334 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC25.83■■□□□ 1.73
Nkx2-3P97334 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC25.83■■□□□ 1.73
Nkx2-3P97334 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Nkx2-3P97334 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Nkx2-3P97334 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
Nkx2-3P97334 Gm27405-201ENSMUST00000184201 112 ntBASIC25.82■■□□□ 1.72
Nkx2-3P97334 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Nkx2-3P97334 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
Nkx2-3P97334 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
Nkx2-3P97334 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Nkx2-3P97334 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Nkx2-3P97334 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Nkx2-3P97334 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Nkx2-3P97334 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC25.81■■□□□ 1.72
Nkx2-3P97334 Gm42569-201ENSMUST00000200539 472 ntBASIC25.81■■□□□ 1.72
Nkx2-3P97334 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Nkx2-3P97334 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC25.81■■□□□ 1.72
Nkx2-3P97334 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Nkx2-3P97334 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC25.81■■□□□ 1.72
Nkx2-3P97334 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Nkx2-3P97334 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Nkx2-3P97334 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Nkx2-3P97334 Gm10033-202ENSMUST00000211874 928 ntBASIC25.79■■□□□ 1.72
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms