Protein–RNA interactions for Protein: P82976

Gbx1, Homeobox protein GBX-1, mousemouse

Predictions only

Length 418 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gbx1P82976 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.01■□□□□ 0.63
Gbx1P82976 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.01■□□□□ 0.63
Gbx1P82976 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Gbx1P82976 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19■□□□□ 0.63
Gbx1P82976 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19■□□□□ 0.63
Gbx1P82976 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Gbx1P82976 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19■□□□□ 0.63
Gbx1P82976 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19■□□□□ 0.63
Gbx1P82976 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Gbx1P82976 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19■□□□□ 0.63
Gbx1P82976 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Gbx1P82976 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Gbx1P82976 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Gbx1P82976 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Gbx1P82976 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Gbx1P82976 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Gbx1P82976 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Gbx1P82976 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Gbx1P82976 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Gbx1P82976 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19■□□□□ 0.63
Gbx1P82976 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Gbx1P82976 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19■□□□□ 0.63
Gbx1P82976 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Gbx1P82976 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Gbx1P82976 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.99■□□□□ 0.63
Gbx1P82976 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Gbx1P82976 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Gbx1P82976 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
Gbx1P82976 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Gbx1P82976 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.99■□□□□ 0.63
Gbx1P82976 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.99■□□□□ 0.63
Gbx1P82976 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Gbx1P82976 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Gbx1P82976 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Gbx1P82976 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Gbx1P82976 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Gbx1P82976 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Gbx1P82976 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gbx1P82976 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.98■□□□□ 0.63
Gbx1P82976 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gbx1P82976 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gbx1P82976 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
Gbx1P82976 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Gbx1P82976 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gbx1P82976 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gbx1P82976 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
Gbx1P82976 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Gbx1P82976 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.97■□□□□ 0.63
Gbx1P82976 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC18.97■□□□□ 0.63
Gbx1P82976 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gbx1P82976 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gbx1P82976 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Gbx1P82976 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC18.97■□□□□ 0.63
Gbx1P82976 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Gbx1P82976 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Gbx1P82976 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC18.96■□□□□ 0.63
Gbx1P82976 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.96■□□□□ 0.63
Gbx1P82976 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.96■□□□□ 0.63
Gbx1P82976 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Gbx1P82976 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Gbx1P82976 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Gbx1P82976 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gbx1P82976 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gbx1P82976 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC18.95■□□□□ 0.62
Gbx1P82976 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
Gbx1P82976 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Gbx1P82976 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Gbx1P82976 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.95■□□□□ 0.62
Gbx1P82976 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gbx1P82976 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gbx1P82976 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gbx1P82976 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.94■□□□□ 0.62
Gbx1P82976 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.94■□□□□ 0.62
Gbx1P82976 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.94■□□□□ 0.62
Gbx1P82976 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gbx1P82976 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Gbx1P82976 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gbx1P82976 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gbx1P82976 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gbx1P82976 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Gbx1P82976 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gbx1P82976 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gbx1P82976 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Gbx1P82976 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Gbx1P82976 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.93■□□□□ 0.62
Gbx1P82976 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gbx1P82976 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Gbx1P82976 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.93■□□□□ 0.62
Gbx1P82976 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.93■□□□□ 0.62
Gbx1P82976 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Gbx1P82976 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Gbx1P82976 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Gbx1P82976 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gbx1P82976 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gbx1P82976 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gbx1P82976 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.92■□□□□ 0.62
Gbx1P82976 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Gbx1P82976 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Gbx1P82976 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Gbx1P82976 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms