Protein–RNA interactions for Protein: P68433

Hist1h3a, Histone H3.1, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h3aP68433 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hist1h3aP68433 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hist1h3aP68433 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Hist1h3aP68433 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Hist1h3aP68433 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.65■□□□□ 0.42
Hist1h3aP68433 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hist1h3aP68433 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC17.65■□□□□ 0.42
Hist1h3aP68433 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hist1h3aP68433 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Hist1h3aP68433 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.65■□□□□ 0.42
Hist1h3aP68433 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hist1h3aP68433 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.64■□□□□ 0.41
Hist1h3aP68433 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.64■□□□□ 0.41
Hist1h3aP68433 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hist1h3aP68433 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hist1h3aP68433 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hist1h3aP68433 Gm9870-201ENSMUST00000063874 645 ntBASIC17.64■□□□□ 0.41
Hist1h3aP68433 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Hist1h3aP68433 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Hist1h3aP68433 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hist1h3aP68433 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC17.63■□□□□ 0.41
Hist1h3aP68433 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hist1h3aP68433 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hist1h3aP68433 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hist1h3aP68433 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Hist1h3aP68433 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Hist1h3aP68433 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hist1h3aP68433 Gm45102-201ENSMUST00000207427 857 ntBASIC17.62■□□□□ 0.41
Hist1h3aP68433 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hist1h3aP68433 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Hist1h3aP68433 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Hist1h3aP68433 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Hist1h3aP68433 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Hist1h3aP68433 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hist1h3aP68433 Notumos-201ENSMUST00000151998 2659 ntBASIC17.61■□□□□ 0.41
Hist1h3aP68433 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Hist1h3aP68433 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC17.61■□□□□ 0.41
Hist1h3aP68433 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Hist1h3aP68433 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.61■□□□□ 0.41
Hist1h3aP68433 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hist1h3aP68433 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Hist1h3aP68433 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hist1h3aP68433 AC166356.1-201ENSMUST00000228236 1426 ntBASIC17.61■□□□□ 0.41
Hist1h3aP68433 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Hist1h3aP68433 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Hist1h3aP68433 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Hist1h3aP68433 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hist1h3aP68433 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hist1h3aP68433 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC17.6■□□□□ 0.41
Hist1h3aP68433 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hist1h3aP68433 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.6■□□□□ 0.41
Hist1h3aP68433 Gm22238-201ENSMUST00000175222 88 ntBASIC17.6■□□□□ 0.41
Hist1h3aP68433 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC17.6■□□□□ 0.41
Hist1h3aP68433 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Hist1h3aP68433 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hist1h3aP68433 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.6■□□□□ 0.41
Hist1h3aP68433 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hist1h3aP68433 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hist1h3aP68433 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Hist1h3aP68433 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hist1h3aP68433 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Hist1h3aP68433 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.59■□□□□ 0.41
Hist1h3aP68433 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hist1h3aP68433 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hist1h3aP68433 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hist1h3aP68433 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Hist1h3aP68433 Gm10657-201ENSMUST00000193528 1031 ntBASIC17.59■□□□□ 0.41
Hist1h3aP68433 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hist1h3aP68433 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hist1h3aP68433 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hist1h3aP68433 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hist1h3aP68433 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hist1h3aP68433 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hist1h3aP68433 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hist1h3aP68433 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hist1h3aP68433 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hist1h3aP68433 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.58■□□□□ 0.4
Hist1h3aP68433 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hist1h3aP68433 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hist1h3aP68433 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hist1h3aP68433 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hist1h3aP68433 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hist1h3aP68433 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Hist1h3aP68433 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Hist1h3aP68433 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
Hist1h3aP68433 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hist1h3aP68433 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hist1h3aP68433 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hist1h3aP68433 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.57■□□□□ 0.4
Hist1h3aP68433 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.57■□□□□ 0.4
Hist1h3aP68433 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hist1h3aP68433 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hist1h3aP68433 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hist1h3aP68433 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Hist1h3aP68433 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hist1h3aP68433 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Hist1h3aP68433 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.56■□□□□ 0.4
Hist1h3aP68433 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hist1h3aP68433 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Hist1h3aP68433 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms