Protein–RNA interactions for Protein: P63154

Crnkl1, Crooked neck-like protein 1, mousemouse

Known RBP Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crnkl1P63154 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Crnkl1P63154 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Crnkl1P63154 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Crnkl1P63154 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Crnkl1P63154 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Crnkl1P63154 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Crnkl1P63154 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Crnkl1P63154 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Crnkl1P63154 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Crnkl1P63154 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Crnkl1P63154 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Crnkl1P63154 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.86■□□□□ 0.77
Crnkl1P63154 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Crnkl1P63154 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Crnkl1P63154 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Crnkl1P63154 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Crnkl1P63154 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Crnkl1P63154 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Crnkl1P63154 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Crnkl1P63154 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Crnkl1P63154 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Crnkl1P63154 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Crnkl1P63154 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Crnkl1P63154 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Crnkl1P63154 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Crnkl1P63154 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Crnkl1P63154 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
Crnkl1P63154 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Crnkl1P63154 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Crnkl1P63154 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.85■□□□□ 0.77
Crnkl1P63154 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Crnkl1P63154 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Crnkl1P63154 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Crnkl1P63154 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Crnkl1P63154 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.85■□□□□ 0.77
Crnkl1P63154 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Crnkl1P63154 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Crnkl1P63154 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Crnkl1P63154 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Crnkl1P63154 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Crnkl1P63154 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Crnkl1P63154 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Crnkl1P63154 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Crnkl1P63154 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Crnkl1P63154 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Crnkl1P63154 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC19.83■□□□□ 0.76
Crnkl1P63154 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Crnkl1P63154 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Crnkl1P63154 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Crnkl1P63154 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Crnkl1P63154 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Crnkl1P63154 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Crnkl1P63154 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Crnkl1P63154 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Crnkl1P63154 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Crnkl1P63154 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Crnkl1P63154 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Crnkl1P63154 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Crnkl1P63154 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Crnkl1P63154 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Crnkl1P63154 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Crnkl1P63154 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.81■□□□□ 0.76
Crnkl1P63154 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Crnkl1P63154 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Crnkl1P63154 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Crnkl1P63154 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Crnkl1P63154 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC19.81■□□□□ 0.76
Crnkl1P63154 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Crnkl1P63154 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Crnkl1P63154 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Crnkl1P63154 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Crnkl1P63154 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Crnkl1P63154 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Crnkl1P63154 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Crnkl1P63154 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Crnkl1P63154 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Crnkl1P63154 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Crnkl1P63154 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC19.8■□□□□ 0.76
Crnkl1P63154 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Crnkl1P63154 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Crnkl1P63154 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Crnkl1P63154 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Crnkl1P63154 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Crnkl1P63154 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Crnkl1P63154 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Crnkl1P63154 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Crnkl1P63154 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Crnkl1P63154 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Crnkl1P63154 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Crnkl1P63154 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Crnkl1P63154 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Crnkl1P63154 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Crnkl1P63154 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Crnkl1P63154 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Crnkl1P63154 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Crnkl1P63154 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Crnkl1P63154 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Crnkl1P63154 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Crnkl1P63154 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Crnkl1P63154 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms