Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ybx1P62960 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.86■□□□□ 0.93
Ybx1P62960 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Ybx1P62960 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Ybx1P62960 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ybx1P62960 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.85■□□□□ 0.93
Ybx1P62960 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ybx1P62960 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.85■□□□□ 0.93
Ybx1P62960 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ybx1P62960 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ybx1P62960 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.85■□□□□ 0.93
Ybx1P62960 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Ybx1P62960 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ybx1P62960 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ybx1P62960 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ybx1P62960 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ybx1P62960 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ybx1P62960 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ybx1P62960 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Ybx1P62960 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.84■□□□□ 0.93
Ybx1P62960 Gm7291-201ENSMUST00000199147 382 ntBASIC20.84■□□□□ 0.93
Ybx1P62960 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC20.84■□□□□ 0.93
Ybx1P62960 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ybx1P62960 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Ybx1P62960 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Ybx1P62960 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ybx1P62960 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Ybx1P62960 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.83■□□□□ 0.93
Ybx1P62960 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
Ybx1P62960 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Ybx1P62960 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ybx1P62960 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ybx1P62960 Gm10493-201ENSMUST00000097270 612 ntBASIC20.83■□□□□ 0.93
Ybx1P62960 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ybx1P62960 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Ybx1P62960 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ybx1P62960 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Ybx1P62960 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Ybx1P62960 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ybx1P62960 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Ybx1P62960 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ybx1P62960 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ybx1P62960 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ybx1P62960 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ybx1P62960 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ybx1P62960 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC20.81■□□□□ 0.92
Ybx1P62960 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.81■□□□□ 0.92
Ybx1P62960 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC20.81■□□□□ 0.92
Ybx1P62960 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ybx1P62960 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ybx1P62960 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ybx1P62960 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC20.8■□□□□ 0.92
Ybx1P62960 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ybx1P62960 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Ybx1P62960 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
Ybx1P62960 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ybx1P62960 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ybx1P62960 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Ybx1P62960 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ybx1P62960 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ybx1P62960 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
Ybx1P62960 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ybx1P62960 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Ybx1P62960 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Ybx1P62960 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ybx1P62960 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ybx1P62960 Smad6-203ENSMUST00000179458 273 ntBASIC20.78■□□□□ 0.92
Ybx1P62960 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.78■□□□□ 0.92
Ybx1P62960 Gm42569-201ENSMUST00000200539 472 ntBASIC20.78■□□□□ 0.92
Ybx1P62960 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ybx1P62960 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ybx1P62960 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ybx1P62960 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ybx1P62960 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Ybx1P62960 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20.77■□□□□ 0.92
Ybx1P62960 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Ybx1P62960 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.77■□□□□ 0.92
Ybx1P62960 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.77■□□□□ 0.92
Ybx1P62960 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Ybx1P62960 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ybx1P62960 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.76■□□□□ 0.91
Ybx1P62960 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC20.76■□□□□ 0.91
Ybx1P62960 AC099934.2-201ENSMUST00000196389 70 ntBASIC20.76■□□□□ 0.91
Ybx1P62960 AC156953.1-201ENSMUST00000196953 70 ntBASIC20.76■□□□□ 0.91
Ybx1P62960 AC157822.2-201ENSMUST00000200291 70 ntBASIC20.76■□□□□ 0.91
Ybx1P62960 Gm42642-201ENSMUST00000200683 355 ntBASIC20.76■□□□□ 0.91
Ybx1P62960 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ybx1P62960 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ybx1P62960 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ybx1P62960 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Ybx1P62960 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Ybx1P62960 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ybx1P62960 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ybx1P62960 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ybx1P62960 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.75■□□□□ 0.91
Ybx1P62960 Gm27405-201ENSMUST00000184201 112 ntBASIC20.75■□□□□ 0.91
Ybx1P62960 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.75■□□□□ 0.91
Ybx1P62960 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC20.75■□□□□ 0.91
Ybx1P62960 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Ybx1P62960 Gm10129-202ENSMUST00000193100 1316 ntBASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms