Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC14.39□□□□□ -0.11
Rpl39P62892 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpl39P62892 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpl39P62892 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC14.39□□□□□ -0.11
Rpl39P62892 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC14.39□□□□□ -0.11
Rpl39P62892 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC14.39□□□□□ -0.11
Rpl39P62892 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rpl39P62892 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC14.39□□□□□ -0.11
Rpl39P62892 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpl39P62892 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpl39P62892 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpl39P62892 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpl39P62892 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC14.38□□□□□ -0.11
Rpl39P62892 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Rpl39P62892 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Rpl39P62892 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Rpl39P62892 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rpl39P62892 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Rpl39P62892 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpl39P62892 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpl39P62892 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC14.38□□□□□ -0.11
Rpl39P62892 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Rpl39P62892 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpl39P62892 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpl39P62892 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpl39P62892 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpl39P62892 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpl39P62892 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Rpl39P62892 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpl39P62892 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpl39P62892 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpl39P62892 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpl39P62892 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpl39P62892 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpl39P62892 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpl39P62892 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Rpl39P62892 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Rpl39P62892 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rpl39P62892 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rpl39P62892 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rpl39P62892 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Rpl39P62892 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC14.36□□□□□ -0.11
Rpl39P62892 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rpl39P62892 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Rpl39P62892 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rpl39P62892 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rpl39P62892 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rpl39P62892 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rpl39P62892 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rpl39P62892 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rpl39P62892 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rpl39P62892 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC14.35□□□□□ -0.11
Rpl39P62892 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Rpl39P62892 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rpl39P62892 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rpl39P62892 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rpl39P62892 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rpl39P62892 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rpl39P62892 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rpl39P62892 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rpl39P62892 Hsf1-204ENSMUST00000226872 2104 ntBASIC14.35□□□□□ -0.11
Rpl39P62892 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rpl39P62892 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Rpl39P62892 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
Rpl39P62892 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpl39P62892 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpl39P62892 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Rpl39P62892 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Rpl39P62892 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpl39P62892 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpl39P62892 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpl39P62892 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpl39P62892 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Rpl39P62892 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rpl39P62892 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpl39P62892 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpl39P62892 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC14.34□□□□□ -0.11
Rpl39P62892 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC14.34□□□□□ -0.11
Rpl39P62892 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rpl39P62892 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rpl39P62892 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rpl39P62892 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rpl39P62892 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rpl39P62892 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rpl39P62892 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rpl39P62892 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC14.33□□□□□ -0.12
Rpl39P62892 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rpl39P62892 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC14.33□□□□□ -0.12
Rpl39P62892 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rpl39P62892 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC14.33□□□□□ -0.12
Rpl39P62892 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rpl39P62892 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rpl39P62892 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rpl39P62892 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC14.32□□□□□ -0.12
Rpl39P62892 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpl39P62892 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rpl39P62892 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC14.32□□□□□ -0.12
Rpl39P62892 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Rpl39P62892 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Rpl39P62892 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms