Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sec61a1P61620 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC17.65■□□□□ 0.42
Sec61a1P61620 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.65■□□□□ 0.42
Sec61a1P61620 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC17.65■□□□□ 0.42
Sec61a1P61620 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC17.65■□□□□ 0.42
Sec61a1P61620 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Sec61a1P61620 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Sec61a1P61620 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sec61a1P61620 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sec61a1P61620 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sec61a1P61620 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sec61a1P61620 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Sec61a1P61620 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.64■□□□□ 0.41
Sec61a1P61620 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sec61a1P61620 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sec61a1P61620 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sec61a1P61620 Gm43403-201ENSMUST00000198011 1786 ntBASIC17.64■□□□□ 0.41
Sec61a1P61620 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sec61a1P61620 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC17.64■□□□□ 0.41
Sec61a1P61620 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sec61a1P61620 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sec61a1P61620 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sec61a1P61620 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Sec61a1P61620 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.64■□□□□ 0.41
Sec61a1P61620 Gm45102-201ENSMUST00000207427 857 ntBASIC17.64■□□□□ 0.41
Sec61a1P61620 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sec61a1P61620 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
Sec61a1P61620 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sec61a1P61620 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC17.64■□□□□ 0.41
Sec61a1P61620 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sec61a1P61620 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sec61a1P61620 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sec61a1P61620 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.64■□□□□ 0.41
Sec61a1P61620 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sec61a1P61620 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.63■□□□□ 0.41
Sec61a1P61620 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sec61a1P61620 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sec61a1P61620 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sec61a1P61620 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sec61a1P61620 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC17.63■□□□□ 0.41
Sec61a1P61620 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Sec61a1P61620 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sec61a1P61620 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sec61a1P61620 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sec61a1P61620 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sec61a1P61620 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sec61a1P61620 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sec61a1P61620 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC17.62■□□□□ 0.41
Sec61a1P61620 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC17.62■□□□□ 0.41
Sec61a1P61620 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sec61a1P61620 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sec61a1P61620 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC17.62■□□□□ 0.41
Sec61a1P61620 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sec61a1P61620 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sec61a1P61620 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.61■□□□□ 0.41
Sec61a1P61620 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Sec61a1P61620 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
Sec61a1P61620 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sec61a1P61620 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sec61a1P61620 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sec61a1P61620 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sec61a1P61620 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sec61a1P61620 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sec61a1P61620 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sec61a1P61620 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Sec61a1P61620 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sec61a1P61620 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sec61a1P61620 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Sec61a1P61620 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sec61a1P61620 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sec61a1P61620 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sec61a1P61620 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Sec61a1P61620 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sec61a1P61620 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Sec61a1P61620 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sec61a1P61620 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sec61a1P61620 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sec61a1P61620 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sec61a1P61620 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sec61a1P61620 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.59■□□□□ 0.41
Sec61a1P61620 Etf1-202ENSMUST00000180351 108 ntBASIC17.59■□□□□ 0.41
Sec61a1P61620 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Sec61a1P61620 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.59■□□□□ 0.41
Sec61a1P61620 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sec61a1P61620 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.58■□□□□ 0.41
Sec61a1P61620 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Sec61a1P61620 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sec61a1P61620 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sec61a1P61620 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC17.58■□□□□ 0.4
Sec61a1P61620 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Sec61a1P61620 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sec61a1P61620 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sec61a1P61620 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Sec61a1P61620 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC17.57■□□□□ 0.4
Sec61a1P61620 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sec61a1P61620 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sec61a1P61620 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sec61a1P61620 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sec61a1P61620 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sec61a1P61620 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 10.6 ms