Protein–RNA interactions for Protein: P56916

Gsc2, Homeobox protein goosecoid-2, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gsc2P56916 Gm5131-201ENSMUST00000212776 1238 ntBASIC16.96■□□□□ 0.31
Gsc2P56916 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Gsc2P56916 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Gsc2P56916 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Gsc2P56916 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Gsc2P56916 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
Gsc2P56916 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gsc2P56916 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gsc2P56916 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC16.95■□□□□ 0.3
Gsc2P56916 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gsc2P56916 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
Gsc2P56916 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gsc2P56916 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Gsc2P56916 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gsc2P56916 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC16.95■□□□□ 0.3
Gsc2P56916 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gsc2P56916 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gsc2P56916 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC16.95■□□□□ 0.3
Gsc2P56916 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gsc2P56916 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gsc2P56916 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Gsc2P56916 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gsc2P56916 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gsc2P56916 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Gsc2P56916 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Gsc2P56916 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gsc2P56916 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Gsc2P56916 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gsc2P56916 Gm10616-201ENSMUST00000205285 2127 ntBASIC16.94■□□□□ 0.3
Gsc2P56916 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gsc2P56916 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Gsc2P56916 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Gsc2P56916 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Gsc2P56916 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Gsc2P56916 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gsc2P56916 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
Gsc2P56916 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.94■□□□□ 0.3
Gsc2P56916 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Gsc2P56916 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC16.94■□□□□ 0.3
Gsc2P56916 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gsc2P56916 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gsc2P56916 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Gsc2P56916 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gsc2P56916 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gsc2P56916 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Gsc2P56916 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gsc2P56916 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gsc2P56916 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC16.93■□□□□ 0.3
Gsc2P56916 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gsc2P56916 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Gsc2P56916 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gsc2P56916 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC16.92■□□□□ 0.3
Gsc2P56916 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC16.92■□□□□ 0.3
Gsc2P56916 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gsc2P56916 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gsc2P56916 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gsc2P56916 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gsc2P56916 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gsc2P56916 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Gsc2P56916 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Gsc2P56916 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC16.91■□□□□ 0.3
Gsc2P56916 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Gsc2P56916 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gsc2P56916 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gsc2P56916 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Gsc2P56916 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gsc2P56916 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC16.91■□□□□ 0.3
Gsc2P56916 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gsc2P56916 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gsc2P56916 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Gsc2P56916 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC16.91■□□□□ 0.3
Gsc2P56916 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gsc2P56916 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gsc2P56916 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Gsc2P56916 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gsc2P56916 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gsc2P56916 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gsc2P56916 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Gsc2P56916 Iqck-206ENSMUST00000208658 2891 ntBASIC16.9■□□□□ 0.3
Gsc2P56916 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Gsc2P56916 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Gsc2P56916 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gsc2P56916 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gsc2P56916 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Gsc2P56916 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Gsc2P56916 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Gsc2P56916 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Gsc2P56916 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Gsc2P56916 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Gsc2P56916 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Gsc2P56916 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gsc2P56916 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gsc2P56916 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Gsc2P56916 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.89■□□□□ 0.29
Gsc2P56916 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Gsc2P56916 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Gsc2P56916 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.88■□□□□ 0.29
Gsc2P56916 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Gsc2P56916 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Gsc2P56916 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 99.9 ms