Protein–RNA interactions for Protein: P56857

Cldn18, Claudin-18, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn18P56857 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cldn18P56857 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Cldn18P56857 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.15■□□□□ 0.5
Cldn18P56857 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Cldn18P56857 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Cldn18P56857 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.15■□□□□ 0.5
Cldn18P56857 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.15■□□□□ 0.5
Cldn18P56857 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cldn18P56857 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cldn18P56857 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Cldn18P56857 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
Cldn18P56857 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cldn18P56857 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
Cldn18P56857 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cldn18P56857 Gm21956-201ENSMUST00000179946 522 ntBASIC18.14■□□□□ 0.49
Cldn18P56857 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.14■□□□□ 0.49
Cldn18P56857 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cldn18P56857 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cldn18P56857 Gm13241-201ENSMUST00000094493 780 ntBASIC18.14■□□□□ 0.49
Cldn18P56857 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cldn18P56857 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cldn18P56857 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Cldn18P56857 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn18P56857 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn18P56857 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn18P56857 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn18P56857 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.13■□□□□ 0.49
Cldn18P56857 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn18P56857 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn18P56857 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn18P56857 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn18P56857 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn18P56857 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cldn18P56857 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Cldn18P56857 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cldn18P56857 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.12■□□□□ 0.49
Cldn18P56857 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cldn18P56857 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cldn18P56857 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Cldn18P56857 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Cldn18P56857 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Cldn18P56857 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cldn18P56857 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cldn18P56857 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Cldn18P56857 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC18.11■□□□□ 0.49
Cldn18P56857 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.11■□□□□ 0.49
Cldn18P56857 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cldn18P56857 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cldn18P56857 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
Cldn18P56857 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cldn18P56857 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cldn18P56857 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
Cldn18P56857 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cldn18P56857 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Cldn18P56857 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cldn18P56857 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Cldn18P56857 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.1■□□□□ 0.49
Cldn18P56857 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cldn18P56857 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC18.1■□□□□ 0.49
Cldn18P56857 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.1■□□□□ 0.49
Cldn18P56857 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cldn18P56857 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cldn18P56857 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Cldn18P56857 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cldn18P56857 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cldn18P56857 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cldn18P56857 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cldn18P56857 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.09■□□□□ 0.49
Cldn18P56857 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cldn18P56857 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cldn18P56857 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.09■□□□□ 0.49
Cldn18P56857 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.09■□□□□ 0.49
Cldn18P56857 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cldn18P56857 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cldn18P56857 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cldn18P56857 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cldn18P56857 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Cldn18P56857 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Cldn18P56857 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cldn18P56857 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC18.08■□□□□ 0.48
Cldn18P56857 AC140930.3-201ENSMUST00000222935 274 ntBASIC18.08■□□□□ 0.48
Cldn18P56857 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
Cldn18P56857 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Cldn18P56857 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Cldn18P56857 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cldn18P56857 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Cldn18P56857 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cldn18P56857 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cldn18P56857 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cldn18P56857 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.07■□□□□ 0.48
Cldn18P56857 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.07■□□□□ 0.48
Cldn18P56857 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cldn18P56857 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Cldn18P56857 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cldn18P56857 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cldn18P56857 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Cldn18P56857 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cldn18P56857 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Cldn18P56857 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Cldn18P56857 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms