Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SmoP56726 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SmoP56726 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SmoP56726 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SmoP56726 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SmoP56726 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SmoP56726 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SmoP56726 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SmoP56726 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SmoP56726 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.42■□□□□ 0.86
SmoP56726 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
SmoP56726 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SmoP56726 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.41■□□□□ 0.86
SmoP56726 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.41■□□□□ 0.86
SmoP56726 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.41■□□□□ 0.86
SmoP56726 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.41■□□□□ 0.86
SmoP56726 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC20.41■□□□□ 0.86
SmoP56726 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
SmoP56726 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
SmoP56726 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.4■□□□□ 0.86
SmoP56726 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.4■□□□□ 0.86
SmoP56726 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
SmoP56726 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.4■□□□□ 0.86
SmoP56726 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
SmoP56726 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SmoP56726 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SmoP56726 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
SmoP56726 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
SmoP56726 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SmoP56726 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
SmoP56726 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
SmoP56726 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
SmoP56726 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SmoP56726 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
SmoP56726 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
SmoP56726 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
SmoP56726 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
SmoP56726 Mir7075-201ENSMUST00000184187 82 ntBASIC20.38■□□□□ 0.85
SmoP56726 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SmoP56726 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.37■□□□□ 0.85
SmoP56726 Gm6139-201ENSMUST00000079261 882 ntBASIC20.37■□□□□ 0.85
SmoP56726 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SmoP56726 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.37■□□□□ 0.85
SmoP56726 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SmoP56726 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SmoP56726 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
SmoP56726 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
SmoP56726 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
SmoP56726 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SmoP56726 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
SmoP56726 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SmoP56726 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
SmoP56726 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.36■□□□□ 0.85
SmoP56726 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
SmoP56726 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
SmoP56726 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
SmoP56726 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SmoP56726 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
SmoP56726 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
SmoP56726 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SmoP56726 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SmoP56726 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.35■□□□□ 0.85
SmoP56726 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SmoP56726 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
SmoP56726 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
SmoP56726 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.35■□□□□ 0.85
SmoP56726 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
SmoP56726 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
SmoP56726 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SmoP56726 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SmoP56726 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SmoP56726 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
SmoP56726 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SmoP56726 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SmoP56726 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
SmoP56726 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.34■□□□□ 0.85
SmoP56726 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
SmoP56726 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
SmoP56726 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
SmoP56726 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SmoP56726 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SmoP56726 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
SmoP56726 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
SmoP56726 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SmoP56726 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SmoP56726 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SmoP56726 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SmoP56726 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SmoP56726 Gm12251-201ENSMUST00000117893 792 ntBASIC20.32■□□□□ 0.84
SmoP56726 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SmoP56726 Mir6236-201ENSMUST00000184437 123 ntBASIC20.32■□□□□ 0.84
SmoP56726 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SmoP56726 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC20.32■□□□□ 0.84
SmoP56726 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SmoP56726 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC20.32■□□□□ 0.84
SmoP56726 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
SmoP56726 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SmoP56726 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SmoP56726 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SmoP56726 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 17.6 ms