Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cdh11P55288 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cdh11P55288 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Cdh11P55288 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Cdh11P55288 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdh11P55288 Nsd1-206ENSMUST00000224918 1001 ntBASIC18.33■□□□□ 0.52
Cdh11P55288 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdh11P55288 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.33■□□□□ 0.52
Cdh11P55288 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cdh11P55288 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.33■□□□□ 0.52
Cdh11P55288 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdh11P55288 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdh11P55288 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdh11P55288 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cdh11P55288 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Cdh11P55288 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdh11P55288 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cdh11P55288 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdh11P55288 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdh11P55288 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC18.31■□□□□ 0.52
Cdh11P55288 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.31■□□□□ 0.52
Cdh11P55288 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdh11P55288 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdh11P55288 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdh11P55288 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cdh11P55288 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdh11P55288 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdh11P55288 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdh11P55288 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdh11P55288 Golph3-202ENSMUST00000226517 2359 ntBASIC18.3■□□□□ 0.52
Cdh11P55288 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdh11P55288 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdh11P55288 Gm7417-201ENSMUST00000192950 473 ntBASIC18.3■□□□□ 0.52
Cdh11P55288 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC18.3■□□□□ 0.52
Cdh11P55288 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.3■□□□□ 0.52
Cdh11P55288 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdh11P55288 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Cdh11P55288 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cdh11P55288 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cdh11P55288 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdh11P55288 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdh11P55288 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC18.29■□□□□ 0.52
Cdh11P55288 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.29■□□□□ 0.52
Cdh11P55288 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdh11P55288 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cdh11P55288 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cdh11P55288 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC18.29■□□□□ 0.52
Cdh11P55288 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdh11P55288 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cdh11P55288 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cdh11P55288 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdh11P55288 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
Cdh11P55288 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdh11P55288 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdh11P55288 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC18.28■□□□□ 0.52
Cdh11P55288 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.28■□□□□ 0.52
Cdh11P55288 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdh11P55288 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdh11P55288 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdh11P55288 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdh11P55288 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cdh11P55288 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cdh11P55288 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cdh11P55288 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdh11P55288 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdh11P55288 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdh11P55288 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdh11P55288 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Cdh11P55288 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cdh11P55288 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdh11P55288 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Cdh11P55288 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Cdh11P55288 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cdh11P55288 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Cdh11P55288 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Cdh11P55288 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.27■□□□□ 0.51
Cdh11P55288 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Cdh11P55288 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Cdh11P55288 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC18.26■□□□□ 0.51
Cdh11P55288 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Cdh11P55288 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cdh11P55288 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cdh11P55288 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.26■□□□□ 0.51
Cdh11P55288 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC18.26■□□□□ 0.51
Cdh11P55288 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdh11P55288 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC18.26■□□□□ 0.51
Cdh11P55288 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdh11P55288 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdh11P55288 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Cdh11P55288 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cdh11P55288 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdh11P55288 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
Cdh11P55288 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdh11P55288 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdh11P55288 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdh11P55288 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cdh11P55288 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdh11P55288 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.25■□□□□ 0.51
Cdh11P55288 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Cdh11P55288 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 15 ms