Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
NcanP55066 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
NcanP55066 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
NcanP55066 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NcanP55066 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NcanP55066 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NcanP55066 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NcanP55066 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NcanP55066 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC21.77■■□□□ 1.08
NcanP55066 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NcanP55066 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NcanP55066 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
NcanP55066 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
NcanP55066 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
NcanP55066 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NcanP55066 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
NcanP55066 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC21.76■■□□□ 1.07
NcanP55066 Gm27045-201ENSMUST00000182145 1402 ntBASIC21.76■■□□□ 1.07
NcanP55066 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
NcanP55066 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
NcanP55066 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NcanP55066 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
NcanP55066 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
NcanP55066 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
NcanP55066 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
NcanP55066 Gm12527-201ENSMUST00000117967 564 ntBASIC21.75■■□□□ 1.07
NcanP55066 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
NcanP55066 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
NcanP55066 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC21.75■■□□□ 1.07
NcanP55066 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC21.75■■□□□ 1.07
NcanP55066 Ap3s1-204ENSMUST00000225520 957 ntBASIC21.75■■□□□ 1.07
NcanP55066 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
NcanP55066 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC21.75■■□□□ 1.07
NcanP55066 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
NcanP55066 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC21.74■■□□□ 1.07
NcanP55066 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC21.74■■□□□ 1.07
NcanP55066 Gm4968-201ENSMUST00000071458 858 ntBASIC21.74■■□□□ 1.07
NcanP55066 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC21.74■■□□□ 1.07
NcanP55066 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC21.74■■□□□ 1.07
NcanP55066 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
NcanP55066 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
NcanP55066 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
NcanP55066 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
NcanP55066 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
NcanP55066 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
NcanP55066 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NcanP55066 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
NcanP55066 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
NcanP55066 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC21.72■■□□□ 1.07
NcanP55066 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC21.72■■□□□ 1.07
NcanP55066 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
NcanP55066 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC21.72■■□□□ 1.07
NcanP55066 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
NcanP55066 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC21.72■■□□□ 1.07
NcanP55066 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NcanP55066 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC21.71■■□□□ 1.07
NcanP55066 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NcanP55066 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC21.71■■□□□ 1.07
NcanP55066 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
NcanP55066 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
NcanP55066 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
NcanP55066 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
NcanP55066 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
NcanP55066 Gm7514-201ENSMUST00000209475 934 ntBASIC21.7■■□□□ 1.06
NcanP55066 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
NcanP55066 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.69■■□□□ 1.06
NcanP55066 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NcanP55066 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NcanP55066 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
NcanP55066 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
NcanP55066 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC21.69■■□□□ 1.06
NcanP55066 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
NcanP55066 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
NcanP55066 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NcanP55066 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
NcanP55066 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
NcanP55066 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
NcanP55066 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NcanP55066 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
NcanP55066 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
NcanP55066 Mir5133-201ENSMUST00000174955 77 ntBASIC21.68■■□□□ 1.06
NcanP55066 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
NcanP55066 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC21.68■■□□□ 1.06
NcanP55066 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
NcanP55066 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
NcanP55066 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
NcanP55066 Gm14281-201ENSMUST00000121700 1294 ntBASIC21.67■■□□□ 1.06
NcanP55066 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
NcanP55066 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
NcanP55066 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NcanP55066 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
NcanP55066 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC21.66■■□□□ 1.06
NcanP55066 Gm42555-201ENSMUST00000199304 1039 ntBASIC21.66■■□□□ 1.06
NcanP55066 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC21.66■■□□□ 1.06
NcanP55066 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
NcanP55066 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
NcanP55066 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
NcanP55066 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC21.65■■□□□ 1.06
NcanP55066 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
NcanP55066 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms