Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Msh6P54276 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Msh6P54276 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Msh6P54276 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Msh6P54276 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
Msh6P54276 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
Msh6P54276 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC26.01■■□□□ 1.75
Msh6P54276 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC26.01■■□□□ 1.75
Msh6P54276 Gm37179-201ENSMUST00000194862 823 ntBASIC26.01■■□□□ 1.75
Msh6P54276 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Msh6P54276 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
Msh6P54276 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC26.01■■□□□ 1.75
Msh6P54276 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC26.01■■□□□ 1.75
Msh6P54276 Gm10129-202ENSMUST00000193100 1316 ntBASIC26■■□□□ 1.75
Msh6P54276 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC26■■□□□ 1.75
Msh6P54276 AC099934.2-201ENSMUST00000196389 70 ntBASIC26■■□□□ 1.75
Msh6P54276 AC156953.1-201ENSMUST00000196953 70 ntBASIC26■■□□□ 1.75
Msh6P54276 AC157822.2-201ENSMUST00000200291 70 ntBASIC26■■□□□ 1.75
Msh6P54276 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Msh6P54276 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Msh6P54276 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC26■■□□□ 1.75
Msh6P54276 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC26■■□□□ 1.75
Msh6P54276 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Msh6P54276 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Msh6P54276 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Msh6P54276 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Msh6P54276 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Msh6P54276 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC25.99■■□□□ 1.75
Msh6P54276 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC25.99■■□□□ 1.75
Msh6P54276 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC25.99■■□□□ 1.75
Msh6P54276 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Msh6P54276 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
Msh6P54276 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC25.98■■□□□ 1.75
Msh6P54276 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC25.98■■□□□ 1.75
Msh6P54276 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Msh6P54276 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
Msh6P54276 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Msh6P54276 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
Msh6P54276 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Msh6P54276 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Msh6P54276 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
Msh6P54276 Gm42642-201ENSMUST00000200683 355 ntBASIC25.96■■□□□ 1.75
Msh6P54276 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC25.96■■□□□ 1.75
Msh6P54276 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Msh6P54276 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC25.96■■□□□ 1.75
Msh6P54276 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Msh6P54276 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC25.95■■□□□ 1.75
Msh6P54276 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC25.95■■□□□ 1.75
Msh6P54276 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.75
Msh6P54276 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
Msh6P54276 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Msh6P54276 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
Msh6P54276 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Msh6P54276 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.74
Msh6P54276 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC25.95■■□□□ 1.74
Msh6P54276 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC25.95■■□□□ 1.74
Msh6P54276 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC25.95■■□□□ 1.74
Msh6P54276 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC25.94■■□□□ 1.74
Msh6P54276 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Msh6P54276 Gm40848-201ENSMUST00000221998 324 ntBASIC25.94■■□□□ 1.74
Msh6P54276 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC25.93■■□□□ 1.74
Msh6P54276 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC25.93■■□□□ 1.74
Msh6P54276 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Msh6P54276 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Msh6P54276 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
Msh6P54276 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC25.93■■□□□ 1.74
Msh6P54276 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Msh6P54276 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Msh6P54276 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Msh6P54276 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC25.92■■□□□ 1.74
Msh6P54276 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC25.92■■□□□ 1.74
Msh6P54276 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Msh6P54276 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Msh6P54276 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC25.91■■□□□ 1.74
Msh6P54276 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC25.91■■□□□ 1.74
Msh6P54276 Smad6-203ENSMUST00000179458 273 ntBASIC25.91■■□□□ 1.74
Msh6P54276 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Msh6P54276 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Msh6P54276 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Msh6P54276 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Msh6P54276 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Msh6P54276 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Msh6P54276 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Msh6P54276 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Msh6P54276 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Msh6P54276 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC25.9■■□□□ 1.74
Msh6P54276 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Msh6P54276 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.74
Msh6P54276 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Msh6P54276 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Msh6P54276 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Msh6P54276 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC25.89■■□□□ 1.74
Msh6P54276 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
Msh6P54276 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC25.89■■□□□ 1.74
Msh6P54276 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
Msh6P54276 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC25.89■■□□□ 1.73
Msh6P54276 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.73
Msh6P54276 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Msh6P54276 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC25.88■■□□□ 1.73
Msh6P54276 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms