Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sox1P53783 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Sox1P53783 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sox1P53783 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sox1P53783 Gm13148-201ENSMUST00000118892 745 ntBASIC20.89■□□□□ 0.93
Sox1P53783 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Sox1P53783 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC20.89■□□□□ 0.93
Sox1P53783 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Sox1P53783 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Sox1P53783 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Sox1P53783 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC20.88■□□□□ 0.93
Sox1P53783 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Sox1P53783 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.88■□□□□ 0.93
Sox1P53783 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.88■□□□□ 0.93
Sox1P53783 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.88■□□□□ 0.93
Sox1P53783 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.88■□□□□ 0.93
Sox1P53783 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Sox1P53783 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sox1P53783 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sox1P53783 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Sox1P53783 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sox1P53783 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Sox1P53783 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.87■□□□□ 0.93
Sox1P53783 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Sox1P53783 Gm37856-201ENSMUST00000191634 999 ntBASIC20.87■□□□□ 0.93
Sox1P53783 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC20.87■□□□□ 0.93
Sox1P53783 Gm5408-201ENSMUST00000197998 747 ntBASIC20.87■□□□□ 0.93
Sox1P53783 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Sox1P53783 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Sox1P53783 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Sox1P53783 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.87■□□□□ 0.93
Sox1P53783 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Sox1P53783 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sox1P53783 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sox1P53783 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Sox1P53783 Gm14281-201ENSMUST00000121700 1294 ntBASIC20.86■□□□□ 0.93
Sox1P53783 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Sox1P53783 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Sox1P53783 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC20.86■□□□□ 0.93
Sox1P53783 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.86■□□□□ 0.93
Sox1P53783 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sox1P53783 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC20.86■□□□□ 0.93
Sox1P53783 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sox1P53783 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Sox1P53783 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC20.85■□□□□ 0.93
Sox1P53783 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.85■□□□□ 0.93
Sox1P53783 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Sox1P53783 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sox1P53783 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Sox1P53783 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Sox1P53783 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sox1P53783 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sox1P53783 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC20.84■□□□□ 0.93
Sox1P53783 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Sox1P53783 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sox1P53783 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Sox1P53783 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sox1P53783 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sox1P53783 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Sox1P53783 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
Sox1P53783 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sox1P53783 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.93
Sox1P53783 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sox1P53783 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Sox1P53783 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
Sox1P53783 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sox1P53783 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Sox1P53783 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC20.83■□□□□ 0.93
Sox1P53783 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Sox1P53783 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
Sox1P53783 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Sox1P53783 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Sox1P53783 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Sox1P53783 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Sox1P53783 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC20.82■□□□□ 0.92
Sox1P53783 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Sox1P53783 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Sox1P53783 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sox1P53783 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
Sox1P53783 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sox1P53783 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sox1P53783 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.81■□□□□ 0.92
Sox1P53783 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sox1P53783 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sox1P53783 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sox1P53783 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sox1P53783 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Sox1P53783 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.8■□□□□ 0.92
Sox1P53783 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
Sox1P53783 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sox1P53783 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sox1P53783 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Sox1P53783 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Sox1P53783 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sox1P53783 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sox1P53783 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sox1P53783 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sox1P53783 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC20.79■□□□□ 0.92
Sox1P53783 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Sox1P53783 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms