Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pdx1P52946 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Pdx1P52946 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pdx1P52946 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
Pdx1P52946 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Pdx1P52946 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pdx1P52946 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
Pdx1P52946 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pdx1P52946 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Pdx1P52946 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pdx1P52946 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.01■□□□□ 0.79
Pdx1P52946 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pdx1P52946 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pdx1P52946 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pdx1P52946 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pdx1P52946 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pdx1P52946 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pdx1P52946 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pdx1P52946 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.01■□□□□ 0.79
Pdx1P52946 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.01■□□□□ 0.79
Pdx1P52946 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pdx1P52946 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pdx1P52946 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.01■□□□□ 0.79
Pdx1P52946 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pdx1P52946 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pdx1P52946 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
Pdx1P52946 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pdx1P52946 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20■□□□□ 0.79
Pdx1P52946 Gm12922-201ENSMUST00000120626 809 ntBASIC20■□□□□ 0.79
Pdx1P52946 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pdx1P52946 Gm43530-201ENSMUST00000195920 274 ntBASIC20■□□□□ 0.79
Pdx1P52946 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Pdx1P52946 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Pdx1P52946 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pdx1P52946 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Pdx1P52946 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pdx1P52946 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pdx1P52946 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pdx1P52946 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pdx1P52946 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pdx1P52946 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.99■□□□□ 0.79
Pdx1P52946 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.99■□□□□ 0.79
Pdx1P52946 Golgb1-201ENSMUST00000023534 498 ntBASIC19.99■□□□□ 0.79
Pdx1P52946 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pdx1P52946 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pdx1P52946 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pdx1P52946 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pdx1P52946 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pdx1P52946 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pdx1P52946 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pdx1P52946 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Pdx1P52946 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pdx1P52946 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pdx1P52946 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Pdx1P52946 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pdx1P52946 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pdx1P52946 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pdx1P52946 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Pdx1P52946 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pdx1P52946 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pdx1P52946 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pdx1P52946 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pdx1P52946 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Pdx1P52946 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Pdx1P52946 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Pdx1P52946 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.96■□□□□ 0.79
Pdx1P52946 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.96■□□□□ 0.79
Pdx1P52946 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
Pdx1P52946 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pdx1P52946 Gm9847-201ENSMUST00000052528 599 ntBASIC19.96■□□□□ 0.79
Pdx1P52946 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pdx1P52946 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pdx1P52946 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pdx1P52946 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pdx1P52946 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Pdx1P52946 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Pdx1P52946 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Pdx1P52946 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Pdx1P52946 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pdx1P52946 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pdx1P52946 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.78
Pdx1P52946 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pdx1P52946 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Pdx1P52946 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Pdx1P52946 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
Pdx1P52946 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pdx1P52946 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Pdx1P52946 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pdx1P52946 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pdx1P52946 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.94■□□□□ 0.78
Pdx1P52946 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pdx1P52946 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pdx1P52946 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Pdx1P52946 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pdx1P52946 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pdx1P52946 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Pdx1P52946 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Pdx1P52946 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
Pdx1P52946 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.92■□□□□ 0.78
Pdx1P52946 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms