Protein–RNA interactions for Protein: P52927

Hmga2, High mobility group protein HMGI-C, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmga2P52927 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Hmga2P52927 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Hmga2P52927 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmga2P52927 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmga2P52927 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Hmga2P52927 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmga2P52927 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmga2P52927 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmga2P52927 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.23■□□□□ 0.35
Hmga2P52927 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmga2P52927 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.23■□□□□ 0.35
Hmga2P52927 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hmga2P52927 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.22■□□□□ 0.35
Hmga2P52927 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmga2P52927 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Hmga2P52927 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Hmga2P52927 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Hmga2P52927 Gm27502-201ENSMUST00000183495 199 ntBASIC17.22■□□□□ 0.35
Hmga2P52927 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Hmga2P52927 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmga2P52927 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmga2P52927 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmga2P52927 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Hmga2P52927 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmga2P52927 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hmga2P52927 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmga2P52927 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.21■□□□□ 0.35
Hmga2P52927 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmga2P52927 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmga2P52927 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmga2P52927 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmga2P52927 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmga2P52927 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17.21■□□□□ 0.35
Hmga2P52927 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC17.21■□□□□ 0.35
Hmga2P52927 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmga2P52927 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hmga2P52927 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Hmga2P52927 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.21■□□□□ 0.34
Hmga2P52927 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC17.2■□□□□ 0.34
Hmga2P52927 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmga2P52927 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmga2P52927 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmga2P52927 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hmga2P52927 Gm43909-201ENSMUST00000203443 1876 ntBASIC17.2■□□□□ 0.34
Hmga2P52927 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Hmga2P52927 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Hmga2P52927 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmga2P52927 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hmga2P52927 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmga2P52927 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmga2P52927 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmga2P52927 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hmga2P52927 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.19■□□□□ 0.34
Hmga2P52927 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Hmga2P52927 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC17.19■□□□□ 0.34
Hmga2P52927 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmga2P52927 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmga2P52927 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmga2P52927 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
Hmga2P52927 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Hmga2P52927 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.18■□□□□ 0.34
Hmga2P52927 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.18■□□□□ 0.34
Hmga2P52927 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC17.18■□□□□ 0.34
Hmga2P52927 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmga2P52927 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmga2P52927 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmga2P52927 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hmga2P52927 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hmga2P52927 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Hmga2P52927 Gm7332-201ENSMUST00000118351 454 ntBASIC17.17■□□□□ 0.34
Hmga2P52927 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC17.17■□□□□ 0.34
Hmga2P52927 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hmga2P52927 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hmga2P52927 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Hmga2P52927 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.16■□□□□ 0.34
Hmga2P52927 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hmga2P52927 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hmga2P52927 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hmga2P52927 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Hmga2P52927 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Hmga2P52927 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hmga2P52927 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hmga2P52927 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Hmga2P52927 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Hmga2P52927 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hmga2P52927 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Hmga2P52927 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hmga2P52927 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Hmga2P52927 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Hmga2P52927 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Hmga2P52927 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.15■□□□□ 0.34
Hmga2P52927 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.15■□□□□ 0.34
Hmga2P52927 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hmga2P52927 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Hmga2P52927 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hmga2P52927 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hmga2P52927 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hmga2P52927 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hmga2P52927 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hmga2P52927 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms