Protein–RNA interactions for Protein: P49962

Srp9, Signal recognition particle 9 kDa protein, mousemouse

Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp9P49962 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Srp9P49962 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC17.08■□□□□ 0.32
Srp9P49962 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Srp9P49962 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC17.08■□□□□ 0.32
Srp9P49962 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC17.08■□□□□ 0.32
Srp9P49962 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Srp9P49962 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.32
Srp9P49962 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.08■□□□□ 0.32
Srp9P49962 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Srp9P49962 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Srp9P49962 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Srp9P49962 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Srp9P49962 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Srp9P49962 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Srp9P49962 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Srp9P49962 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Srp9P49962 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Srp9P49962 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Srp9P49962 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Srp9P49962 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Srp9P49962 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Srp9P49962 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Srp9P49962 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.07■□□□□ 0.32
Srp9P49962 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Srp9P49962 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Srp9P49962 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Srp9P49962 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.07■□□□□ 0.32
Srp9P49962 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.07■□□□□ 0.32
Srp9P49962 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Srp9P49962 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.06■□□□□ 0.32
Srp9P49962 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Srp9P49962 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Srp9P49962 Gm43566-201ENSMUST00000196851 808 ntBASIC17.06■□□□□ 0.32
Srp9P49962 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
Srp9P49962 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Srp9P49962 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
Srp9P49962 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Srp9P49962 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC17.06■□□□□ 0.32
Srp9P49962 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Srp9P49962 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Srp9P49962 AC158990.1-201ENSMUST00000221450 2016 ntBASIC17.05■□□□□ 0.32
Srp9P49962 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Srp9P49962 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Srp9P49962 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Srp9P49962 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Srp9P49962 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Srp9P49962 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Srp9P49962 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Srp9P49962 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.04■□□□□ 0.32
Srp9P49962 Gm8093-201ENSMUST00000128935 1892 ntBASIC17.04■□□□□ 0.32
Srp9P49962 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Srp9P49962 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Srp9P49962 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Srp9P49962 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC17.04■□□□□ 0.32
Srp9P49962 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Srp9P49962 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Srp9P49962 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Srp9P49962 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Srp9P49962 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Srp9P49962 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Srp9P49962 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Srp9P49962 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Srp9P49962 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Srp9P49962 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Srp9P49962 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Srp9P49962 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Srp9P49962 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Srp9P49962 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.03■□□□□ 0.32
Srp9P49962 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Srp9P49962 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Srp9P49962 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Srp9P49962 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Srp9P49962 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Srp9P49962 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Srp9P49962 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Srp9P49962 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Srp9P49962 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Srp9P49962 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Srp9P49962 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Srp9P49962 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC17.02■□□□□ 0.32
Srp9P49962 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Srp9P49962 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Srp9P49962 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC17.02■□□□□ 0.31
Srp9P49962 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.02■□□□□ 0.31
Srp9P49962 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Srp9P49962 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Srp9P49962 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
Srp9P49962 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Srp9P49962 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Srp9P49962 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17■□□□□ 0.31
Srp9P49962 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Srp9P49962 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Srp9P49962 Gm16464-201ENSMUST00000117815 1095 ntBASIC17■□□□□ 0.31
Srp9P49962 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Srp9P49962 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Srp9P49962 Gm43545-201ENSMUST00000196765 2779 ntBASIC17■□□□□ 0.31
Srp9P49962 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17■□□□□ 0.31
Srp9P49962 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Srp9P49962 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Srp9P49962 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms