Protein–RNA interactions for Protein: P47741

Tnfrsf4, Tumor necrosis factor receptor superfamily member 4, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf4P47741 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Tnfrsf4P47741 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Tnfrsf4P47741 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Tnfrsf4P47741 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.53■□□□□ 0.88
Tnfrsf4P47741 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Tnfrsf4P47741 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tnfrsf4P47741 Gm5913-201ENSMUST00000119397 1399 ntBASIC20.53■□□□□ 0.88
Tnfrsf4P47741 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Tnfrsf4P47741 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Tnfrsf4P47741 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Tnfrsf4P47741 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.52■□□□□ 0.88
Tnfrsf4P47741 CT025689.6-201ENSMUST00000224991 1104 ntBASIC20.52■□□□□ 0.88
Tnfrsf4P47741 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Tnfrsf4P47741 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tnfrsf4P47741 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tnfrsf4P47741 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Tnfrsf4P47741 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Tnfrsf4P47741 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tnfrsf4P47741 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Tnfrsf4P47741 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
Tnfrsf4P47741 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.51■□□□□ 0.87
Tnfrsf4P47741 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Tnfrsf4P47741 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tnfrsf4P47741 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Tnfrsf4P47741 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Tnfrsf4P47741 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Tnfrsf4P47741 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tnfrsf4P47741 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Tnfrsf4P47741 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Tnfrsf4P47741 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Tnfrsf4P47741 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.5■□□□□ 0.87
Tnfrsf4P47741 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Tnfrsf4P47741 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.5■□□□□ 0.87
Tnfrsf4P47741 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Tnfrsf4P47741 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Tnfrsf4P47741 Mir6236-201ENSMUST00000184437 123 ntBASIC20.49■□□□□ 0.87
Tnfrsf4P47741 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tnfrsf4P47741 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tnfrsf4P47741 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Tnfrsf4P47741 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.48■□□□□ 0.87
Tnfrsf4P47741 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.48■□□□□ 0.87
Tnfrsf4P47741 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Tnfrsf4P47741 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.48■□□□□ 0.87
Tnfrsf4P47741 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.48■□□□□ 0.87
Tnfrsf4P47741 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tnfrsf4P47741 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tnfrsf4P47741 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Tnfrsf4P47741 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.47■□□□□ 0.87
Tnfrsf4P47741 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Tnfrsf4P47741 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tnfrsf4P47741 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Tnfrsf4P47741 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Tnfrsf4P47741 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Tnfrsf4P47741 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC20.47■□□□□ 0.87
Tnfrsf4P47741 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.47■□□□□ 0.87
Tnfrsf4P47741 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.47■□□□□ 0.87
Tnfrsf4P47741 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tnfrsf4P47741 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tnfrsf4P47741 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Tnfrsf4P47741 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.46■□□□□ 0.87
Tnfrsf4P47741 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC20.46■□□□□ 0.87
Tnfrsf4P47741 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tnfrsf4P47741 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tnfrsf4P47741 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.46■□□□□ 0.87
Tnfrsf4P47741 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tnfrsf4P47741 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tnfrsf4P47741 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Tnfrsf4P47741 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.87
Tnfrsf4P47741 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tnfrsf4P47741 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.45■□□□□ 0.86
Tnfrsf4P47741 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC20.45■□□□□ 0.86
Tnfrsf4P47741 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.45■□□□□ 0.86
Tnfrsf4P47741 Gm9988-201ENSMUST00000069786 435 ntBASIC20.45■□□□□ 0.86
Tnfrsf4P47741 Gm10602-201ENSMUST00000098239 609 ntBASIC20.45■□□□□ 0.86
Tnfrsf4P47741 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tnfrsf4P47741 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Tnfrsf4P47741 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tnfrsf4P47741 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC20.44■□□□□ 0.86
Tnfrsf4P47741 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.44■□□□□ 0.86
Tnfrsf4P47741 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tnfrsf4P47741 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tnfrsf4P47741 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.44■□□□□ 0.86
Tnfrsf4P47741 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tnfrsf4P47741 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
Tnfrsf4P47741 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tnfrsf4P47741 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Tnfrsf4P47741 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
Tnfrsf4P47741 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tnfrsf4P47741 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Tnfrsf4P47741 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Tnfrsf4P47741 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Tnfrsf4P47741 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tnfrsf4P47741 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tnfrsf4P47741 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC20.43■□□□□ 0.86
Tnfrsf4P47741 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Tnfrsf4P47741 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Tnfrsf4P47741 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC20.43■□□□□ 0.86
Tnfrsf4P47741 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tnfrsf4P47741 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Tnfrsf4P47741 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms