Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sox18P43680 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sox18P43680 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sox18P43680 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sox18P43680 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.42■□□□□ 0.7
Sox18P43680 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sox18P43680 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sox18P43680 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sox18P43680 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sox18P43680 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.41■□□□□ 0.7
Sox18P43680 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Sox18P43680 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Sox18P43680 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sox18P43680 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sox18P43680 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sox18P43680 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Sox18P43680 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Sox18P43680 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sox18P43680 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sox18P43680 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sox18P43680 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sox18P43680 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sox18P43680 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sox18P43680 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Sox18P43680 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.4■□□□□ 0.7
Sox18P43680 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC19.4■□□□□ 0.7
Sox18P43680 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Sox18P43680 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.4■□□□□ 0.7
Sox18P43680 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sox18P43680 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Sox18P43680 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Sox18P43680 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Sox18P43680 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Sox18P43680 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sox18P43680 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sox18P43680 Gm43530-201ENSMUST00000195920 274 ntBASIC19.39■□□□□ 0.69
Sox18P43680 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Sox18P43680 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.39■□□□□ 0.69
Sox18P43680 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Sox18P43680 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC19.39■□□□□ 0.69
Sox18P43680 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sox18P43680 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.38■□□□□ 0.69
Sox18P43680 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Sox18P43680 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC19.38■□□□□ 0.69
Sox18P43680 Gm22325-201ENSMUST00000158904 308 ntBASIC19.38■□□□□ 0.69
Sox18P43680 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC19.38■□□□□ 0.69
Sox18P43680 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC19.38■□□□□ 0.69
Sox18P43680 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.38■□□□□ 0.69
Sox18P43680 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.38■□□□□ 0.69
Sox18P43680 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Sox18P43680 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.38■□□□□ 0.69
Sox18P43680 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Sox18P43680 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Sox18P43680 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.38■□□□□ 0.69
Sox18P43680 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Sox18P43680 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Sox18P43680 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Sox18P43680 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sox18P43680 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Sox18P43680 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sox18P43680 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sox18P43680 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Sox18P43680 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Sox18P43680 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sox18P43680 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sox18P43680 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sox18P43680 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Sox18P43680 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sox18P43680 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Sox18P43680 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
Sox18P43680 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Sox18P43680 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Sox18P43680 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Sox18P43680 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sox18P43680 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Sox18P43680 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Sox18P43680 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Sox18P43680 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Sox18P43680 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sox18P43680 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sox18P43680 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sox18P43680 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.69
Sox18P43680 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Sox18P43680 Gm10653-202ENSMUST00000139570 835 ntBASIC19.33■□□□□ 0.68
Sox18P43680 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.33■□□□□ 0.68
Sox18P43680 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sox18P43680 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sox18P43680 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
Sox18P43680 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sox18P43680 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sox18P43680 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sox18P43680 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Sox18P43680 AC165080.2-201ENSMUST00000217491 1530 ntBASIC19.32■□□□□ 0.68
Sox18P43680 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Sox18P43680 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
Sox18P43680 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sox18P43680 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.31■□□□□ 0.68
Sox18P43680 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sox18P43680 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sox18P43680 Gm12441-201ENSMUST00000121806 588 ntBASIC19.31■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms