Protein–RNA interactions for Protein: P43277

Hist1h1d, Histone H1.3, mousemouse

Known RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1dP43277 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Hist1h1dP43277 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Hist1h1dP43277 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hist1h1dP43277 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hist1h1dP43277 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Hist1h1dP43277 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Hist1h1dP43277 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hist1h1dP43277 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hist1h1dP43277 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hist1h1dP43277 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hist1h1dP43277 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Hist1h1dP43277 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hist1h1dP43277 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.12■□□□□ 0.33
Hist1h1dP43277 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Hist1h1dP43277 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hist1h1dP43277 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Hist1h1dP43277 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hist1h1dP43277 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Hist1h1dP43277 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hist1h1dP43277 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC17.12■□□□□ 0.33
Hist1h1dP43277 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Hist1h1dP43277 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Hist1h1dP43277 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hist1h1dP43277 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hist1h1dP43277 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hist1h1dP43277 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hist1h1dP43277 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Hist1h1dP43277 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Hist1h1dP43277 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hist1h1dP43277 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hist1h1dP43277 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hist1h1dP43277 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Hist1h1dP43277 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hist1h1dP43277 Mir6538-201ENSMUST00000183713 110 ntBASIC17.1■□□□□ 0.33
Hist1h1dP43277 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC17.1■□□□□ 0.33
Hist1h1dP43277 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
Hist1h1dP43277 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hist1h1dP43277 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Hist1h1dP43277 Gm5067-201ENSMUST00000170449 1009 ntBASIC17.09■□□□□ 0.33
Hist1h1dP43277 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hist1h1dP43277 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC17.09■□□□□ 0.33
Hist1h1dP43277 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC17.09■□□□□ 0.33
Hist1h1dP43277 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hist1h1dP43277 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hist1h1dP43277 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hist1h1dP43277 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hist1h1dP43277 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Hist1h1dP43277 Iqck-206ENSMUST00000208658 2891 ntBASIC17.08■□□□□ 0.33
Hist1h1dP43277 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
Hist1h1dP43277 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hist1h1dP43277 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Hist1h1dP43277 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hist1h1dP43277 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Hist1h1dP43277 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hist1h1dP43277 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Hist1h1dP43277 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.08■□□□□ 0.32
Hist1h1dP43277 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hist1h1dP43277 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Hist1h1dP43277 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Hist1h1dP43277 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.08■□□□□ 0.32
Hist1h1dP43277 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hist1h1dP43277 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Hist1h1dP43277 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hist1h1dP43277 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
Hist1h1dP43277 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Hist1h1dP43277 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
Hist1h1dP43277 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hist1h1dP43277 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Hist1h1dP43277 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hist1h1dP43277 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Hist1h1dP43277 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Hist1h1dP43277 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hist1h1dP43277 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hist1h1dP43277 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hist1h1dP43277 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hist1h1dP43277 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hist1h1dP43277 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
Hist1h1dP43277 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Hist1h1dP43277 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC17.05■□□□□ 0.32
Hist1h1dP43277 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Hist1h1dP43277 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Hist1h1dP43277 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Hist1h1dP43277 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Hist1h1dP43277 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC17.04■□□□□ 0.32
Hist1h1dP43277 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Hist1h1dP43277 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC17.04■□□□□ 0.32
Hist1h1dP43277 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.04■□□□□ 0.32
Hist1h1dP43277 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hist1h1dP43277 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Hist1h1dP43277 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hist1h1dP43277 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hist1h1dP43277 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC17.04■□□□□ 0.32
Hist1h1dP43277 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hist1h1dP43277 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hist1h1dP43277 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hist1h1dP43277 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hist1h1dP43277 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.04■□□□□ 0.32
Hist1h1dP43277 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Hist1h1dP43277 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Hist1h1dP43277 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 10.3 ms