Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Abca1P41233 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Abca1P41233 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Abca1P41233 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Abca1P41233 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Abca1P41233 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC16.69■□□□□ 0.26
Abca1P41233 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Abca1P41233 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Abca1P41233 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Abca1P41233 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Abca1P41233 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Abca1P41233 Gm7143-201ENSMUST00000222811 859 ntBASIC16.68■□□□□ 0.26
Abca1P41233 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Abca1P41233 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Abca1P41233 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Abca1P41233 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Abca1P41233 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Abca1P41233 Spcs1-204ENSMUST00000226782 949 ntBASIC16.68■□□□□ 0.26
Abca1P41233 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Abca1P41233 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Abca1P41233 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Abca1P41233 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Abca1P41233 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Abca1P41233 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Abca1P41233 Gm42642-201ENSMUST00000200683 355 ntBASIC16.67■□□□□ 0.26
Abca1P41233 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Abca1P41233 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Abca1P41233 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC16.67■□□□□ 0.26
Abca1P41233 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Abca1P41233 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC16.67■□□□□ 0.26
Abca1P41233 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Abca1P41233 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC16.67■□□□□ 0.26
Abca1P41233 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC16.67■□□□□ 0.26
Abca1P41233 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC16.67■□□□□ 0.26
Abca1P41233 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Abca1P41233 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Abca1P41233 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC16.67■□□□□ 0.26
Abca1P41233 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC16.67■□□□□ 0.26
Abca1P41233 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
Abca1P41233 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
Abca1P41233 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Abca1P41233 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Abca1P41233 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Abca1P41233 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Abca1P41233 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Abca1P41233 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Abca1P41233 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Abca1P41233 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Abca1P41233 Gm37179-201ENSMUST00000194862 823 ntBASIC16.66■□□□□ 0.26
Abca1P41233 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Abca1P41233 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Abca1P41233 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Abca1P41233 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Abca1P41233 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Abca1P41233 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Abca1P41233 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Abca1P41233 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Abca1P41233 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Abca1P41233 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Abca1P41233 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Abca1P41233 Gm27011-201ENSMUST00000182352 972 ntBASIC16.65■□□□□ 0.26
Abca1P41233 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC16.65■□□□□ 0.26
Abca1P41233 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Abca1P41233 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC16.64■□□□□ 0.26
Abca1P41233 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Abca1P41233 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Abca1P41233 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC16.64■□□□□ 0.25
Abca1P41233 Gm10129-202ENSMUST00000193100 1316 ntBASIC16.64■□□□□ 0.25
Abca1P41233 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Abca1P41233 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Abca1P41233 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Abca1P41233 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Abca1P41233 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC16.64■□□□□ 0.25
Abca1P41233 Gm42569-201ENSMUST00000200539 472 ntBASIC16.64■□□□□ 0.25
Abca1P41233 Gm43060-201ENSMUST00000200621 289 ntBASIC16.64■□□□□ 0.25
Abca1P41233 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Abca1P41233 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC16.64■□□□□ 0.25
Abca1P41233 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Abca1P41233 Dmtn-209ENSMUST00000228295 2572 ntBASIC16.64■□□□□ 0.25
Abca1P41233 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
Abca1P41233 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Abca1P41233 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Abca1P41233 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Abca1P41233 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Abca1P41233 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Abca1P41233 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.63■□□□□ 0.25
Abca1P41233 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.63■□□□□ 0.25
Abca1P41233 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.63■□□□□ 0.25
Abca1P41233 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Abca1P41233 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Abca1P41233 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Abca1P41233 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Abca1P41233 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Abca1P41233 AC153962.1-201ENSMUST00000218530 1948 ntBASIC16.63■□□□□ 0.25
Abca1P41233 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Abca1P41233 AC112142.1-201ENSMUST00000228796 918 ntBASIC16.63■□□□□ 0.25
Abca1P41233 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Abca1P41233 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Abca1P41233 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
Abca1P41233 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 38.4 ms