Protein–RNA interactions for Protein: P35582

Foxa1, Hepatocyte nuclear factor 3-alpha, mousemouse

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxa1P35582 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Foxa1P35582 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Foxa1P35582 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Foxa1P35582 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Foxa1P35582 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Foxa1P35582 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Foxa1P35582 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Foxa1P35582 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Foxa1P35582 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Foxa1P35582 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Foxa1P35582 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Foxa1P35582 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.71■□□□□ 0.59
Foxa1P35582 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Foxa1P35582 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Foxa1P35582 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Foxa1P35582 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Foxa1P35582 Gm12922-201ENSMUST00000120626 809 ntBASIC18.7■□□□□ 0.58
Foxa1P35582 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Foxa1P35582 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Foxa1P35582 Gm43530-201ENSMUST00000195920 274 ntBASIC18.7■□□□□ 0.58
Foxa1P35582 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Foxa1P35582 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Foxa1P35582 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Foxa1P35582 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Foxa1P35582 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Foxa1P35582 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Foxa1P35582 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Foxa1P35582 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Foxa1P35582 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.69■□□□□ 0.58
Foxa1P35582 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Foxa1P35582 Golgb1-201ENSMUST00000023534 498 ntBASIC18.69■□□□□ 0.58
Foxa1P35582 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Foxa1P35582 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Foxa1P35582 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Foxa1P35582 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Foxa1P35582 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Foxa1P35582 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Foxa1P35582 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.69■□□□□ 0.58
Foxa1P35582 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Foxa1P35582 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Foxa1P35582 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Foxa1P35582 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Foxa1P35582 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Foxa1P35582 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
Foxa1P35582 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Foxa1P35582 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
Foxa1P35582 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC18.68■□□□□ 0.58
Foxa1P35582 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.68■□□□□ 0.58
Foxa1P35582 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Foxa1P35582 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.68■□□□□ 0.58
Foxa1P35582 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Foxa1P35582 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Foxa1P35582 Gm9847-201ENSMUST00000052528 599 ntBASIC18.68■□□□□ 0.58
Foxa1P35582 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Foxa1P35582 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Foxa1P35582 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Foxa1P35582 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Foxa1P35582 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Foxa1P35582 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Foxa1P35582 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Foxa1P35582 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Foxa1P35582 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC18.67■□□□□ 0.58
Foxa1P35582 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Foxa1P35582 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Foxa1P35582 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.67■□□□□ 0.58
Foxa1P35582 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Foxa1P35582 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Foxa1P35582 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC18.67■□□□□ 0.58
Foxa1P35582 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Foxa1P35582 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Foxa1P35582 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Foxa1P35582 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Foxa1P35582 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Foxa1P35582 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Foxa1P35582 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Foxa1P35582 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Foxa1P35582 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
Foxa1P35582 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Foxa1P35582 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Foxa1P35582 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Foxa1P35582 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Foxa1P35582 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.66■□□□□ 0.58
Foxa1P35582 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
Foxa1P35582 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Foxa1P35582 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Foxa1P35582 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Foxa1P35582 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Foxa1P35582 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Foxa1P35582 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Foxa1P35582 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Foxa1P35582 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Foxa1P35582 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Foxa1P35582 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Foxa1P35582 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Foxa1P35582 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Foxa1P35582 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Foxa1P35582 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Foxa1P35582 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Foxa1P35582 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Foxa1P35582 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms