Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Thbs1P35441 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC18.72■□□□□ 0.59
Thbs1P35441 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Thbs1P35441 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Thbs1P35441 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Thbs1P35441 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Thbs1P35441 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Thbs1P35441 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Thbs1P35441 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Thbs1P35441 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Thbs1P35441 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Thbs1P35441 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Thbs1P35441 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
Thbs1P35441 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Thbs1P35441 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Thbs1P35441 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Thbs1P35441 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Thbs1P35441 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Thbs1P35441 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Thbs1P35441 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC18.7■□□□□ 0.58
Thbs1P35441 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Thbs1P35441 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Thbs1P35441 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Thbs1P35441 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Thbs1P35441 Gm37035-201ENSMUST00000194809 2148 ntBASIC18.7■□□□□ 0.58
Thbs1P35441 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Thbs1P35441 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Thbs1P35441 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Thbs1P35441 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Thbs1P35441 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Thbs1P35441 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Thbs1P35441 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Thbs1P35441 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Thbs1P35441 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Thbs1P35441 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Thbs1P35441 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Thbs1P35441 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Thbs1P35441 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Thbs1P35441 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC18.68■□□□□ 0.58
Thbs1P35441 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Thbs1P35441 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Thbs1P35441 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Thbs1P35441 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Thbs1P35441 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Thbs1P35441 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Thbs1P35441 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.67■□□□□ 0.58
Thbs1P35441 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Thbs1P35441 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
Thbs1P35441 Gm9959-201ENSMUST00000068277 390 ntBASIC18.67■□□□□ 0.58
Thbs1P35441 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.67■□□□□ 0.58
Thbs1P35441 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Thbs1P35441 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Thbs1P35441 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Thbs1P35441 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.66■□□□□ 0.58
Thbs1P35441 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.66■□□□□ 0.58
Thbs1P35441 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Thbs1P35441 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Thbs1P35441 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Thbs1P35441 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Thbs1P35441 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Thbs1P35441 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Thbs1P35441 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Thbs1P35441 Gm14117-201ENSMUST00000122417 843 ntBASIC18.66■□□□□ 0.58
Thbs1P35441 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.66■□□□□ 0.58
Thbs1P35441 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC18.66■□□□□ 0.58
Thbs1P35441 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Thbs1P35441 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
Thbs1P35441 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Thbs1P35441 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
Thbs1P35441 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Thbs1P35441 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Thbs1P35441 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.65■□□□□ 0.58
Thbs1P35441 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC18.64■□□□□ 0.58
Thbs1P35441 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Thbs1P35441 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
Thbs1P35441 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC18.64■□□□□ 0.57
Thbs1P35441 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Thbs1P35441 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Thbs1P35441 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Thbs1P35441 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Thbs1P35441 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Thbs1P35441 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Thbs1P35441 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Thbs1P35441 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Thbs1P35441 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.63■□□□□ 0.57
Thbs1P35441 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Thbs1P35441 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Thbs1P35441 Gm7417-201ENSMUST00000192950 473 ntBASIC18.62■□□□□ 0.57
Thbs1P35441 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Thbs1P35441 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Thbs1P35441 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Thbs1P35441 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Thbs1P35441 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Thbs1P35441 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Thbs1P35441 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Thbs1P35441 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Thbs1P35441 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.62■□□□□ 0.57
Thbs1P35441 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Thbs1P35441 Gm34220-201ENSMUST00000223001 2709 ntBASIC18.61■□□□□ 0.57
Thbs1P35441 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms