Protein–RNA interactions for Protein: P28653

Bgn, Biglycan, mousemouse

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BgnP28653 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
BgnP28653 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BgnP28653 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BgnP28653 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.72■□□□□ 0.59
BgnP28653 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
BgnP28653 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
BgnP28653 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.71■□□□□ 0.59
BgnP28653 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BgnP28653 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BgnP28653 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.71■□□□□ 0.59
BgnP28653 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
BgnP28653 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
BgnP28653 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BgnP28653 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
BgnP28653 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
BgnP28653 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.71■□□□□ 0.58
BgnP28653 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BgnP28653 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BgnP28653 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.7■□□□□ 0.58
BgnP28653 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BgnP28653 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
BgnP28653 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BgnP28653 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
BgnP28653 Gm9806-201ENSMUST00000051080 552 ntBASIC18.7■□□□□ 0.58
BgnP28653 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BgnP28653 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BgnP28653 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
BgnP28653 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC18.7■□□□□ 0.58
BgnP28653 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BgnP28653 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
BgnP28653 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BgnP28653 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
BgnP28653 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.69■□□□□ 0.58
BgnP28653 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
BgnP28653 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
BgnP28653 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BgnP28653 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
BgnP28653 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
BgnP28653 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
BgnP28653 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.69■□□□□ 0.58
BgnP28653 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BgnP28653 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
BgnP28653 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
BgnP28653 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
BgnP28653 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BgnP28653 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
BgnP28653 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BgnP28653 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BgnP28653 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BgnP28653 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
BgnP28653 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.68■□□□□ 0.58
BgnP28653 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
BgnP28653 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BgnP28653 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
BgnP28653 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BgnP28653 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BgnP28653 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
BgnP28653 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
BgnP28653 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BgnP28653 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
BgnP28653 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
BgnP28653 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
BgnP28653 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC18.66■□□□□ 0.58
BgnP28653 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BgnP28653 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BgnP28653 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BgnP28653 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
BgnP28653 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BgnP28653 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BgnP28653 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
BgnP28653 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BgnP28653 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BgnP28653 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
BgnP28653 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
BgnP28653 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC18.65■□□□□ 0.58
BgnP28653 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
BgnP28653 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
BgnP28653 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
BgnP28653 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
BgnP28653 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC18.64■□□□□ 0.57
BgnP28653 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BgnP28653 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
BgnP28653 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC18.64■□□□□ 0.57
BgnP28653 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC18.64■□□□□ 0.57
BgnP28653 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BgnP28653 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
BgnP28653 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BgnP28653 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BgnP28653 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
BgnP28653 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
BgnP28653 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
BgnP28653 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BgnP28653 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BgnP28653 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC18.63■□□□□ 0.57
BgnP28653 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
BgnP28653 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
BgnP28653 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
BgnP28653 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC18.63■□□□□ 0.57
BgnP28653 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.63■□□□□ 0.57
BgnP28653 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms