Protein–RNA interactions for Protein: P27512

Cd40, Tumor necrosis factor receptor superfamily member 5, mousemouse

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40P27512 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cd40P27512 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Cd40P27512 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cd40P27512 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cd40P27512 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Cd40P27512 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cd40P27512 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cd40P27512 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cd40P27512 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC18.34■□□□□ 0.53
Cd40P27512 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC18.34■□□□□ 0.53
Cd40P27512 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Cd40P27512 Golgb1-201ENSMUST00000023534 498 ntBASIC18.34■□□□□ 0.53
Cd40P27512 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cd40P27512 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cd40P27512 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Cd40P27512 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.34■□□□□ 0.53
Cd40P27512 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Cd40P27512 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cd40P27512 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cd40P27512 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Cd40P27512 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Cd40P27512 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
Cd40P27512 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Cd40P27512 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.33■□□□□ 0.53
Cd40P27512 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cd40P27512 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Cd40P27512 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cd40P27512 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cd40P27512 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cd40P27512 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Cd40P27512 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cd40P27512 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cd40P27512 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd40P27512 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd40P27512 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.32■□□□□ 0.52
Cd40P27512 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.32■□□□□ 0.52
Cd40P27512 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cd40P27512 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cd40P27512 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cd40P27512 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.32■□□□□ 0.52
Cd40P27512 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cd40P27512 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cd40P27512 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd40P27512 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd40P27512 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd40P27512 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd40P27512 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd40P27512 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd40P27512 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd40P27512 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd40P27512 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd40P27512 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd40P27512 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Cd40P27512 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Cd40P27512 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cd40P27512 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cd40P27512 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cd40P27512 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cd40P27512 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cd40P27512 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC18.3■□□□□ 0.52
Cd40P27512 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Cd40P27512 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cd40P27512 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Cd40P27512 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
Cd40P27512 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cd40P27512 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cd40P27512 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cd40P27512 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cd40P27512 Gm9847-201ENSMUST00000052528 599 ntBASIC18.3■□□□□ 0.52
Cd40P27512 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Cd40P27512 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cd40P27512 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cd40P27512 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cd40P27512 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cd40P27512 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cd40P27512 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cd40P27512 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cd40P27512 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cd40P27512 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.29■□□□□ 0.52
Cd40P27512 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cd40P27512 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.29■□□□□ 0.52
Cd40P27512 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Cd40P27512 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cd40P27512 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cd40P27512 Mir6236-201ENSMUST00000184437 123 ntBASIC18.28■□□□□ 0.52
Cd40P27512 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.28■□□□□ 0.52
Cd40P27512 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC18.28■□□□□ 0.52
Cd40P27512 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cd40P27512 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.28■□□□□ 0.52
Cd40P27512 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Cd40P27512 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.28■□□□□ 0.52
Cd40P27512 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cd40P27512 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Cd40P27512 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cd40P27512 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cd40P27512 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Cd40P27512 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cd40P27512 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
Cd40P27512 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.27■□□□□ 0.52
Cd40P27512 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms