Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pde6bP23440 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
Pde6bP23440 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC21.98■■□□□ 1.11
Pde6bP23440 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Pde6bP23440 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pde6bP23440 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pde6bP23440 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pde6bP23440 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.97■■□□□ 1.11
Pde6bP23440 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pde6bP23440 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.97■■□□□ 1.11
Pde6bP23440 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.97■■□□□ 1.11
Pde6bP23440 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Pde6bP23440 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.97■■□□□ 1.11
Pde6bP23440 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pde6bP23440 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pde6bP23440 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pde6bP23440 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
Pde6bP23440 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Pde6bP23440 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Pde6bP23440 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pde6bP23440 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
Pde6bP23440 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC21.96■■□□□ 1.11
Pde6bP23440 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pde6bP23440 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
Pde6bP23440 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Pde6bP23440 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pde6bP23440 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.95■■□□□ 1.1
Pde6bP23440 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pde6bP23440 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Pde6bP23440 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pde6bP23440 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
Pde6bP23440 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pde6bP23440 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
Pde6bP23440 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pde6bP23440 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pde6bP23440 Gm5874-201ENSMUST00000096101 508 ntBASIC21.94■■□□□ 1.1
Pde6bP23440 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pde6bP23440 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pde6bP23440 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pde6bP23440 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Pde6bP23440 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC21.94■■□□□ 1.1
Pde6bP23440 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pde6bP23440 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pde6bP23440 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Pde6bP23440 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pde6bP23440 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Pde6bP23440 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Pde6bP23440 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
Pde6bP23440 Gm6085-201ENSMUST00000182774 1470 ntBASIC21.93■■□□□ 1.1
Pde6bP23440 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC21.93■■□□□ 1.1
Pde6bP23440 Spcs1-204ENSMUST00000226782 949 ntBASIC21.93■■□□□ 1.1
Pde6bP23440 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC21.93■■□□□ 1.1
Pde6bP23440 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC21.93■■□□□ 1.1
Pde6bP23440 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
Pde6bP23440 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Pde6bP23440 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC21.92■■□□□ 1.1
Pde6bP23440 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.92■■□□□ 1.1
Pde6bP23440 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pde6bP23440 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pde6bP23440 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC21.92■■□□□ 1.1
Pde6bP23440 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
Pde6bP23440 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pde6bP23440 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC21.91■■□□□ 1.1
Pde6bP23440 Gm26833-201ENSMUST00000180899 440 ntBASIC21.91■■□□□ 1.1
Pde6bP23440 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pde6bP23440 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pde6bP23440 Gm26766-202ENSMUST00000227544 2347 ntBASIC21.91■■□□□ 1.1
Pde6bP23440 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Pde6bP23440 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pde6bP23440 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Pde6bP23440 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Pde6bP23440 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.9■■□□□ 1.1
Pde6bP23440 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Pde6bP23440 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Pde6bP23440 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pde6bP23440 Cdc34b-202ENSMUST00000188741 1252 ntBASIC21.9■■□□□ 1.1
Pde6bP23440 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pde6bP23440 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Pde6bP23440 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Pde6bP23440 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Pde6bP23440 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Pde6bP23440 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Pde6bP23440 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.9■■□□□ 1.1
Pde6bP23440 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Pde6bP23440 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC21.89■■□□□ 1.09
Pde6bP23440 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pde6bP23440 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC21.89■■□□□ 1.09
Pde6bP23440 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pde6bP23440 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.89■■□□□ 1.09
Pde6bP23440 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC21.89■■□□□ 1.09
Pde6bP23440 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Pde6bP23440 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Pde6bP23440 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.88■■□□□ 1.09
Pde6bP23440 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Pde6bP23440 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Pde6bP23440 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC21.88■■□□□ 1.09
Pde6bP23440 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Pde6bP23440 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pde6bP23440 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Pde6bP23440 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms