Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Rb1P13405 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Rb1P13405 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rb1P13405 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Rb1P13405 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rb1P13405 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rb1P13405 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
Rb1P13405 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Rb1P13405 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.45■□□□□ 0.86
Rb1P13405 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Rb1P13405 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Rb1P13405 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rb1P13405 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.45■□□□□ 0.86
Rb1P13405 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rb1P13405 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Rb1P13405 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Rb1P13405 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Rb1P13405 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Rb1P13405 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rb1P13405 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rb1P13405 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
Rb1P13405 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rb1P13405 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
Rb1P13405 Gm43137-201ENSMUST00000198052 594 ntBASIC20.44■□□□□ 0.86
Rb1P13405 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Rb1P13405 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Rb1P13405 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rb1P13405 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rb1P13405 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.43■□□□□ 0.86
Rb1P13405 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Rb1P13405 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Rb1P13405 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rb1P13405 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rb1P13405 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.43■□□□□ 0.86
Rb1P13405 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rb1P13405 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Rb1P13405 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rb1P13405 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rb1P13405 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rb1P13405 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rb1P13405 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Rb1P13405 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.42■□□□□ 0.86
Rb1P13405 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC20.42■□□□□ 0.86
Rb1P13405 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC20.42■□□□□ 0.86
Rb1P13405 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rb1P13405 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.42■□□□□ 0.86
Rb1P13405 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rb1P13405 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rb1P13405 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rb1P13405 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Rb1P13405 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.41■□□□□ 0.86
Rb1P13405 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rb1P13405 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rb1P13405 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC20.41■□□□□ 0.86
Rb1P13405 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
Rb1P13405 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rb1P13405 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rb1P13405 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rb1P13405 Mir7075-201ENSMUST00000184187 82 ntBASIC20.41■□□□□ 0.86
Rb1P13405 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rb1P13405 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.41■□□□□ 0.86
Rb1P13405 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rb1P13405 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.4■□□□□ 0.86
Rb1P13405 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.4■□□□□ 0.86
Rb1P13405 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rb1P13405 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Rb1P13405 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.4■□□□□ 0.86
Rb1P13405 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.4■□□□□ 0.86
Rb1P13405 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rb1P13405 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
Rb1P13405 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rb1P13405 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rb1P13405 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
Rb1P13405 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rb1P13405 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rb1P13405 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.39■□□□□ 0.85
Rb1P13405 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
Rb1P13405 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rb1P13405 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.39■□□□□ 0.85
Rb1P13405 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rb1P13405 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rb1P13405 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rb1P13405 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rb1P13405 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.38■□□□□ 0.85
Rb1P13405 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rb1P13405 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rb1P13405 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rb1P13405 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.37■□□□□ 0.85
Rb1P13405 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rb1P13405 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rb1P13405 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Rb1P13405 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Rb1P13405 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.37■□□□□ 0.85
Rb1P13405 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rb1P13405 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.37■□□□□ 0.85
Rb1P13405 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rb1P13405 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rb1P13405 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rb1P13405 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rb1P13405 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms