Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cntn1P12960 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cntn1P12960 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cntn1P12960 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cntn1P12960 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.39■□□□□ 0.69
Cntn1P12960 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cntn1P12960 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cntn1P12960 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.38■□□□□ 0.69
Cntn1P12960 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cntn1P12960 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC19.38■□□□□ 0.69
Cntn1P12960 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cntn1P12960 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
Cntn1P12960 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.37■□□□□ 0.69
Cntn1P12960 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.37■□□□□ 0.69
Cntn1P12960 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.37■□□□□ 0.69
Cntn1P12960 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cntn1P12960 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cntn1P12960 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cntn1P12960 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Cntn1P12960 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cntn1P12960 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cntn1P12960 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Cntn1P12960 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC19.36■□□□□ 0.69
Cntn1P12960 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC19.36■□□□□ 0.69
Cntn1P12960 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cntn1P12960 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cntn1P12960 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cntn1P12960 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cntn1P12960 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Cntn1P12960 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Cntn1P12960 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Cntn1P12960 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Cntn1P12960 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.35■□□□□ 0.69
Cntn1P12960 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Cntn1P12960 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Cntn1P12960 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cntn1P12960 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cntn1P12960 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cntn1P12960 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cntn1P12960 Serp2-204ENSMUST00000228055 705 ntBASIC19.34■□□□□ 0.69
Cntn1P12960 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Cntn1P12960 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Cntn1P12960 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Cntn1P12960 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cntn1P12960 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Cntn1P12960 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Cntn1P12960 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Cntn1P12960 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.33■□□□□ 0.68
Cntn1P12960 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Cntn1P12960 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Cntn1P12960 Mir7075-201ENSMUST00000184187 82 ntBASIC19.33■□□□□ 0.68
Cntn1P12960 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Cntn1P12960 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Cntn1P12960 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Cntn1P12960 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cntn1P12960 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.33■□□□□ 0.68
Cntn1P12960 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cntn1P12960 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Cntn1P12960 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Cntn1P12960 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC19.32■□□□□ 0.68
Cntn1P12960 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.32■□□□□ 0.68
Cntn1P12960 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.32■□□□□ 0.68
Cntn1P12960 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.32■□□□□ 0.68
Cntn1P12960 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.32■□□□□ 0.68
Cntn1P12960 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cntn1P12960 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cntn1P12960 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cntn1P12960 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cntn1P12960 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cntn1P12960 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cntn1P12960 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.31■□□□□ 0.68
Cntn1P12960 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cntn1P12960 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC19.31■□□□□ 0.68
Cntn1P12960 Gm6139-201ENSMUST00000079261 882 ntBASIC19.31■□□□□ 0.68
Cntn1P12960 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
Cntn1P12960 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cntn1P12960 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cntn1P12960 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
Cntn1P12960 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cntn1P12960 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cntn1P12960 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Cntn1P12960 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cntn1P12960 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.3■□□□□ 0.68
Cntn1P12960 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.3■□□□□ 0.68
Cntn1P12960 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cntn1P12960 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Cntn1P12960 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cntn1P12960 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cntn1P12960 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cntn1P12960 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cntn1P12960 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Cntn1P12960 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cntn1P12960 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cntn1P12960 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cntn1P12960 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cntn1P12960 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.29■□□□□ 0.68
Cntn1P12960 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.29■□□□□ 0.68
Cntn1P12960 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Cntn1P12960 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Cntn1P12960 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms