Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccl3P10855 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Ccl3P10855 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccl3P10855 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ccl3P10855 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.04■□□□□ 0.48
Ccl3P10855 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccl3P10855 Gm11421-201ENSMUST00000122124 294 ntBASIC18.03■□□□□ 0.48
Ccl3P10855 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccl3P10855 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Ccl3P10855 Gm10033-202ENSMUST00000211874 928 ntBASIC18.03■□□□□ 0.48
Ccl3P10855 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ccl3P10855 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Ccl3P10855 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccl3P10855 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccl3P10855 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ccl3P10855 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Ccl3P10855 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
Ccl3P10855 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ccl3P10855 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ccl3P10855 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.03■□□□□ 0.48
Ccl3P10855 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Ccl3P10855 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Ccl3P10855 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.02■□□□□ 0.47
Ccl3P10855 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccl3P10855 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccl3P10855 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccl3P10855 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC18.01■□□□□ 0.47
Ccl3P10855 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccl3P10855 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ccl3P10855 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ccl3P10855 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ccl3P10855 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ccl3P10855 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ccl3P10855 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
Ccl3P10855 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ccl3P10855 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ccl3P10855 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ccl3P10855 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18■□□□□ 0.47
Ccl3P10855 AV356131-201ENSMUST00000206201 750 ntBASIC18■□□□□ 0.47
Ccl3P10855 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Ccl3P10855 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ccl3P10855 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ccl3P10855 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC18■□□□□ 0.47
Ccl3P10855 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ccl3P10855 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccl3P10855 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccl3P10855 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccl3P10855 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ccl3P10855 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
Ccl3P10855 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.99■□□□□ 0.47
Ccl3P10855 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.99■□□□□ 0.47
Ccl3P10855 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ccl3P10855 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC17.99■□□□□ 0.47
Ccl3P10855 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC17.99■□□□□ 0.47
Ccl3P10855 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
Ccl3P10855 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
Ccl3P10855 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC17.98■□□□□ 0.47
Ccl3P10855 Gm42778-201ENSMUST00000199644 553 ntBASIC17.98■□□□□ 0.47
Ccl3P10855 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ccl3P10855 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC17.98■□□□□ 0.47
Ccl3P10855 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccl3P10855 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ccl3P10855 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ccl3P10855 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccl3P10855 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ccl3P10855 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccl3P10855 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.96■□□□□ 0.47
Ccl3P10855 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.96■□□□□ 0.47
Ccl3P10855 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ccl3P10855 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccl3P10855 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC17.96■□□□□ 0.47
Ccl3P10855 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccl3P10855 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Ccl3P10855 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ccl3P10855 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ccl3P10855 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Ccl3P10855 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
Ccl3P10855 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Ccl3P10855 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ccl3P10855 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccl3P10855 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccl3P10855 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ccl3P10855 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
Ccl3P10855 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC17.95■□□□□ 0.46
Ccl3P10855 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC17.95■□□□□ 0.46
Ccl3P10855 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ccl3P10855 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ccl3P10855 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccl3P10855 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccl3P10855 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC17.94■□□□□ 0.46
Ccl3P10855 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.94■□□□□ 0.46
Ccl3P10855 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ccl3P10855 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccl3P10855 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccl3P10855 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccl3P10855 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ccl3P10855 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccl3P10855 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ccl3P10855 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.94■□□□□ 0.46
Ccl3P10855 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms