Protein–RNA interactions for Protein: P0CW02

Ly6c1, Lymphocyte antigen 6C1, mousemouse

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ly6c1P0CW02 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ly6c1P0CW02 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ly6c1P0CW02 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ly6c1P0CW02 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC16.9■□□□□ 0.3
Ly6c1P0CW02 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ly6c1P0CW02 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ly6c1P0CW02 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ly6c1P0CW02 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Ly6c1P0CW02 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ly6c1P0CW02 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Ly6c1P0CW02 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ly6c1P0CW02 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ly6c1P0CW02 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ly6c1P0CW02 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ly6c1P0CW02 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ly6c1P0CW02 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ly6c1P0CW02 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ly6c1P0CW02 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ly6c1P0CW02 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ly6c1P0CW02 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ly6c1P0CW02 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ly6c1P0CW02 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Ly6c1P0CW02 Gm27454-201ENSMUST00000185090 204 ntBASIC16.88■□□□□ 0.29
Ly6c1P0CW02 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Ly6c1P0CW02 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Ly6c1P0CW02 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ly6c1P0CW02 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC16.88■□□□□ 0.29
Ly6c1P0CW02 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Ly6c1P0CW02 Snhg20-203ENSMUST00000182811 2153 ntBASIC16.88■□□□□ 0.29
Ly6c1P0CW02 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ly6c1P0CW02 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
Ly6c1P0CW02 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ly6c1P0CW02 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC16.87■□□□□ 0.29
Ly6c1P0CW02 Appbp2os-202ENSMUST00000206972 447 ntBASIC16.87■□□□□ 0.29
Ly6c1P0CW02 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ly6c1P0CW02 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Ly6c1P0CW02 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ly6c1P0CW02 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ly6c1P0CW02 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ly6c1P0CW02 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ly6c1P0CW02 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ly6c1P0CW02 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ly6c1P0CW02 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ly6c1P0CW02 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Ly6c1P0CW02 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ly6c1P0CW02 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ly6c1P0CW02 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC16.86■□□□□ 0.29
Ly6c1P0CW02 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC16.86■□□□□ 0.29
Ly6c1P0CW02 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Ly6c1P0CW02 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ly6c1P0CW02 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ly6c1P0CW02 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ly6c1P0CW02 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC16.86■□□□□ 0.29
Ly6c1P0CW02 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Ly6c1P0CW02 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ly6c1P0CW02 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ly6c1P0CW02 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ly6c1P0CW02 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ly6c1P0CW02 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ly6c1P0CW02 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ly6c1P0CW02 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Ly6c1P0CW02 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ly6c1P0CW02 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ly6c1P0CW02 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ly6c1P0CW02 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Ly6c1P0CW02 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
Ly6c1P0CW02 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Ly6c1P0CW02 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ly6c1P0CW02 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ly6c1P0CW02 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ly6c1P0CW02 Gm38160-201ENSMUST00000193090 2499 ntBASIC16.84■□□□□ 0.29
Ly6c1P0CW02 Gm12821-201ENSMUST00000120022 600 ntBASIC16.84■□□□□ 0.29
Ly6c1P0CW02 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC16.84■□□□□ 0.29
Ly6c1P0CW02 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ly6c1P0CW02 Gm43759-201ENSMUST00000196925 1261 ntBASIC16.84■□□□□ 0.29
Ly6c1P0CW02 Gm43137-201ENSMUST00000198052 594 ntBASIC16.84■□□□□ 0.29
Ly6c1P0CW02 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC16.84■□□□□ 0.29
Ly6c1P0CW02 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ly6c1P0CW02 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ly6c1P0CW02 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ly6c1P0CW02 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ly6c1P0CW02 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
Ly6c1P0CW02 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ly6c1P0CW02 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ly6c1P0CW02 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Ly6c1P0CW02 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.29
Ly6c1P0CW02 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ly6c1P0CW02 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ly6c1P0CW02 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ly6c1P0CW02 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ly6c1P0CW02 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ly6c1P0CW02 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC16.83■□□□□ 0.28
Ly6c1P0CW02 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC16.83■□□□□ 0.28
Ly6c1P0CW02 Gm45417-201ENSMUST00000209533 758 ntBASIC16.83■□□□□ 0.28
Ly6c1P0CW02 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ly6c1P0CW02 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ly6c1P0CW02 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Ly6c1P0CW02 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
Ly6c1P0CW02 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ly6c1P0CW02 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 204.8 ms