Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smim1P0C8K7 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smim1P0C8K7 Fam105a-203ENSMUST00000226170 3043 ntBASIC13.97□□□□□ -0.17
Smim1P0C8K7 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smim1P0C8K7 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
Smim1P0C8K7 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smim1P0C8K7 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Smim1P0C8K7 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smim1P0C8K7 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Smim1P0C8K7 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smim1P0C8K7 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Smim1P0C8K7 Gm43231-201ENSMUST00000202960 2258 ntBASIC13.97□□□□□ -0.17
Smim1P0C8K7 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smim1P0C8K7 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smim1P0C8K7 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smim1P0C8K7 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smim1P0C8K7 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Smim1P0C8K7 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC13.96□□□□□ -0.17
Smim1P0C8K7 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
Smim1P0C8K7 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Smim1P0C8K7 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Smim1P0C8K7 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Smim1P0C8K7 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smim1P0C8K7 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smim1P0C8K7 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC13.95□□□□□ -0.18
Smim1P0C8K7 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smim1P0C8K7 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smim1P0C8K7 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Smim1P0C8K7 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smim1P0C8K7 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smim1P0C8K7 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC13.95□□□□□ -0.18
Smim1P0C8K7 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Smim1P0C8K7 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Smim1P0C8K7 Gm5540-201ENSMUST00000131852 1848 ntBASIC13.94□□□□□ -0.18
Smim1P0C8K7 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smim1P0C8K7 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Smim1P0C8K7 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smim1P0C8K7 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smim1P0C8K7 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Smim1P0C8K7 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC13.94□□□□□ -0.18
Smim1P0C8K7 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smim1P0C8K7 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smim1P0C8K7 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smim1P0C8K7 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Smim1P0C8K7 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Smim1P0C8K7 Gm35558-201ENSMUST00000222675 2219 ntBASIC13.94□□□□□ -0.18
Smim1P0C8K7 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC13.93□□□□□ -0.18
Smim1P0C8K7 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smim1P0C8K7 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC13.93□□□□□ -0.18
Smim1P0C8K7 Gm13889-201ENSMUST00000099689 1386 ntBASIC13.93□□□□□ -0.18
Smim1P0C8K7 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smim1P0C8K7 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smim1P0C8K7 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Smim1P0C8K7 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smim1P0C8K7 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smim1P0C8K7 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smim1P0C8K7 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Smim1P0C8K7 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smim1P0C8K7 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smim1P0C8K7 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
Smim1P0C8K7 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smim1P0C8K7 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smim1P0C8K7 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smim1P0C8K7 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC13.92□□□□□ -0.18
Smim1P0C8K7 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Smim1P0C8K7 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smim1P0C8K7 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Smim1P0C8K7 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smim1P0C8K7 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smim1P0C8K7 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smim1P0C8K7 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Smim1P0C8K7 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Smim1P0C8K7 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smim1P0C8K7 Gm9812-201ENSMUST00000061934 968 ntBASIC13.91□□□□□ -0.18
Smim1P0C8K7 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smim1P0C8K7 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Smim1P0C8K7 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Smim1P0C8K7 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Smim1P0C8K7 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smim1P0C8K7 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Smim1P0C8K7 Fgfr3-202ENSMUST00000087820 2630 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Smim1P0C8K7 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smim1P0C8K7 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smim1P0C8K7 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC13.9□□□□□ -0.18
Smim1P0C8K7 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smim1P0C8K7 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Smim1P0C8K7 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smim1P0C8K7 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Smim1P0C8K7 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Smim1P0C8K7 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC13.9□□□□□ -0.19
Smim1P0C8K7 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
Smim1P0C8K7 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smim1P0C8K7 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smim1P0C8K7 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC13.89□□□□□ -0.19
Smim1P0C8K7 AC122317.2-201ENSMUST00000218708 1248 ntBASIC13.89□□□□□ -0.19
Smim1P0C8K7 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
Smim1P0C8K7 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smim1P0C8K7 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Smim1P0C8K7 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Smim1P0C8K7 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms