Protein–RNA interactions for Protein: P0C6B2

Ptcra, Pre T-cell antigen receptor alpha, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PtcraP0C6B2 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PtcraP0C6B2 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.58■□□□□ 0.4
PtcraP0C6B2 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC17.58■□□□□ 0.4
PtcraP0C6B2 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
PtcraP0C6B2 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17.58■□□□□ 0.4
PtcraP0C6B2 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC17.58■□□□□ 0.4
PtcraP0C6B2 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC17.58■□□□□ 0.4
PtcraP0C6B2 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
PtcraP0C6B2 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
PtcraP0C6B2 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
PtcraP0C6B2 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
PtcraP0C6B2 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
PtcraP0C6B2 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
PtcraP0C6B2 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PtcraP0C6B2 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PtcraP0C6B2 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
PtcraP0C6B2 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PtcraP0C6B2 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PtcraP0C6B2 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
PtcraP0C6B2 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC17.57■□□□□ 0.4
PtcraP0C6B2 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PtcraP0C6B2 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
PtcraP0C6B2 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
PtcraP0C6B2 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC17.56■□□□□ 0.4
PtcraP0C6B2 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
PtcraP0C6B2 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PtcraP0C6B2 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
PtcraP0C6B2 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC17.56■□□□□ 0.4
PtcraP0C6B2 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.56■□□□□ 0.4
PtcraP0C6B2 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC17.56■□□□□ 0.4
PtcraP0C6B2 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PtcraP0C6B2 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PtcraP0C6B2 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PtcraP0C6B2 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PtcraP0C6B2 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PtcraP0C6B2 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
PtcraP0C6B2 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
PtcraP0C6B2 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PtcraP0C6B2 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
PtcraP0C6B2 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PtcraP0C6B2 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PtcraP0C6B2 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC17.55■□□□□ 0.4
PtcraP0C6B2 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PtcraP0C6B2 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PtcraP0C6B2 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
PtcraP0C6B2 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
PtcraP0C6B2 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
PtcraP0C6B2 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
PtcraP0C6B2 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
PtcraP0C6B2 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
PtcraP0C6B2 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PtcraP0C6B2 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PtcraP0C6B2 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PtcraP0C6B2 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
PtcraP0C6B2 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
PtcraP0C6B2 Mir6236-201ENSMUST00000184437 123 ntBASIC17.54■□□□□ 0.4
PtcraP0C6B2 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PtcraP0C6B2 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
PtcraP0C6B2 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PtcraP0C6B2 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
PtcraP0C6B2 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.53■□□□□ 0.4
PtcraP0C6B2 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
PtcraP0C6B2 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PtcraP0C6B2 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
PtcraP0C6B2 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PtcraP0C6B2 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.53■□□□□ 0.4
PtcraP0C6B2 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PtcraP0C6B2 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.53■□□□□ 0.4
PtcraP0C6B2 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
PtcraP0C6B2 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
PtcraP0C6B2 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
PtcraP0C6B2 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
PtcraP0C6B2 Golgb1-201ENSMUST00000023534 498 ntBASIC17.52■□□□□ 0.4
PtcraP0C6B2 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
PtcraP0C6B2 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
PtcraP0C6B2 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PtcraP0C6B2 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.51■□□□□ 0.39
PtcraP0C6B2 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PtcraP0C6B2 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PtcraP0C6B2 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PtcraP0C6B2 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PtcraP0C6B2 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PtcraP0C6B2 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PtcraP0C6B2 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PtcraP0C6B2 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PtcraP0C6B2 Gm8770-201ENSMUST00000121113 1109 ntBASIC17.5■□□□□ 0.39
PtcraP0C6B2 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC17.5■□□□□ 0.39
PtcraP0C6B2 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PtcraP0C6B2 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PtcraP0C6B2 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
PtcraP0C6B2 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PtcraP0C6B2 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PtcraP0C6B2 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PtcraP0C6B2 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
PtcraP0C6B2 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PtcraP0C6B2 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
PtcraP0C6B2 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PtcraP0C6B2 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
PtcraP0C6B2 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PtcraP0C6B2 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 66.1 ms