Protein–RNA interactions for Protein: O89016

Abcd4, ATP-binding cassette sub-family D member 4, mousemouse

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abcd4O89016 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Abcd4O89016 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Abcd4O89016 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Abcd4O89016 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Abcd4O89016 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Abcd4O89016 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Abcd4O89016 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.21■□□□□ 0.51
Abcd4O89016 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.21■□□□□ 0.51
Abcd4O89016 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.21■□□□□ 0.51
Abcd4O89016 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Abcd4O89016 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Abcd4O89016 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Abcd4O89016 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Abcd4O89016 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Abcd4O89016 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Abcd4O89016 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Abcd4O89016 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Abcd4O89016 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Abcd4O89016 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Abcd4O89016 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Abcd4O89016 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Abcd4O89016 Kdm3b-204ENSMUST00000224715 2032 ntBASIC18.2■□□□□ 0.5
Abcd4O89016 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC18.19■□□□□ 0.5
Abcd4O89016 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Abcd4O89016 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.19■□□□□ 0.5
Abcd4O89016 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Abcd4O89016 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Abcd4O89016 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Abcd4O89016 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Abcd4O89016 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.18■□□□□ 0.5
Abcd4O89016 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Abcd4O89016 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Abcd4O89016 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Abcd4O89016 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC18.18■□□□□ 0.5
Abcd4O89016 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Abcd4O89016 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Abcd4O89016 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Abcd4O89016 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Abcd4O89016 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Abcd4O89016 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Abcd4O89016 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Abcd4O89016 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Abcd4O89016 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Abcd4O89016 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Abcd4O89016 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Abcd4O89016 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Abcd4O89016 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Abcd4O89016 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Abcd4O89016 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Abcd4O89016 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Abcd4O89016 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Abcd4O89016 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Abcd4O89016 Gm7143-201ENSMUST00000222811 859 ntBASIC18.17■□□□□ 0.5
Abcd4O89016 Serp2-204ENSMUST00000228055 705 ntBASIC18.17■□□□□ 0.5
Abcd4O89016 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC18.17■□□□□ 0.5
Abcd4O89016 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Abcd4O89016 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Abcd4O89016 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Abcd4O89016 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Abcd4O89016 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Abcd4O89016 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Abcd4O89016 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Abcd4O89016 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Abcd4O89016 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Abcd4O89016 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
Abcd4O89016 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.16■□□□□ 0.5
Abcd4O89016 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Abcd4O89016 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Abcd4O89016 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Abcd4O89016 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Abcd4O89016 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Abcd4O89016 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Abcd4O89016 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Abcd4O89016 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Abcd4O89016 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Abcd4O89016 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC18.15■□□□□ 0.5
Abcd4O89016 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.15■□□□□ 0.5
Abcd4O89016 Gm43759-201ENSMUST00000196925 1261 ntBASIC18.15■□□□□ 0.5
Abcd4O89016 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Abcd4O89016 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Abcd4O89016 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Abcd4O89016 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Abcd4O89016 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Abcd4O89016 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
Abcd4O89016 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Abcd4O89016 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Abcd4O89016 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Abcd4O89016 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Abcd4O89016 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Abcd4O89016 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Abcd4O89016 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Abcd4O89016 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Abcd4O89016 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Abcd4O89016 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.13■□□□□ 0.49
Abcd4O89016 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC18.13■□□□□ 0.49
Abcd4O89016 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Abcd4O89016 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Abcd4O89016 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Abcd4O89016 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Abcd4O89016 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms