Protein–RNA interactions for Protein: O88895

Hdac3, Histone deacetylase 3, mousemouse

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac3O88895 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.98■□□□□ 0.47
Hdac3O88895 Gm5913-201ENSMUST00000119397 1399 ntBASIC17.98■□□□□ 0.47
Hdac3O88895 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hdac3O88895 Gm44949-201ENSMUST00000206423 1450 ntBASIC17.98■□□□□ 0.47
Hdac3O88895 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hdac3O88895 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hdac3O88895 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hdac3O88895 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Hdac3O88895 Gm10620-201ENSMUST00000098379 1332 ntBASIC17.98■□□□□ 0.47
Hdac3O88895 Snhg20-203ENSMUST00000182811 2153 ntBASIC17.97■□□□□ 0.47
Hdac3O88895 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hdac3O88895 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hdac3O88895 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Hdac3O88895 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC17.97■□□□□ 0.47
Hdac3O88895 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC17.97■□□□□ 0.47
Hdac3O88895 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC17.97■□□□□ 0.47
Hdac3O88895 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.97■□□□□ 0.47
Hdac3O88895 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hdac3O88895 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Hdac3O88895 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hdac3O88895 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hdac3O88895 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Hdac3O88895 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Hdac3O88895 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Hdac3O88895 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Hdac3O88895 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Hdac3O88895 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hdac3O88895 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hdac3O88895 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC17.95■□□□□ 0.46
Hdac3O88895 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hdac3O88895 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hdac3O88895 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Hdac3O88895 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
Hdac3O88895 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Hdac3O88895 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hdac3O88895 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Hdac3O88895 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
Hdac3O88895 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Hdac3O88895 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Hdac3O88895 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Hdac3O88895 Gm40881-201ENSMUST00000223397 166 ntBASIC17.94■□□□□ 0.46
Hdac3O88895 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hdac3O88895 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hdac3O88895 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hdac3O88895 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hdac3O88895 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Hdac3O88895 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Hdac3O88895 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Hdac3O88895 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hdac3O88895 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Hdac3O88895 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hdac3O88895 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hdac3O88895 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Hdac3O88895 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Hdac3O88895 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC17.92■□□□□ 0.46
Hdac3O88895 Gm15820-201ENSMUST00000201566 728 ntBASIC17.92■□□□□ 0.46
Hdac3O88895 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Hdac3O88895 Gm5131-201ENSMUST00000212776 1238 ntBASIC17.92■□□□□ 0.46
Hdac3O88895 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hdac3O88895 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hdac3O88895 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hdac3O88895 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hdac3O88895 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Hdac3O88895 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hdac3O88895 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hdac3O88895 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Hdac3O88895 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Hdac3O88895 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hdac3O88895 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Hdac3O88895 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hdac3O88895 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Hdac3O88895 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hdac3O88895 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Hdac3O88895 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Hdac3O88895 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hdac3O88895 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hdac3O88895 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hdac3O88895 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Hdac3O88895 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Hdac3O88895 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hdac3O88895 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hdac3O88895 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hdac3O88895 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hdac3O88895 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Hdac3O88895 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hdac3O88895 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17.9■□□□□ 0.46
Hdac3O88895 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Hdac3O88895 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC17.9■□□□□ 0.46
Hdac3O88895 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Hdac3O88895 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Hdac3O88895 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Hdac3O88895 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.89■□□□□ 0.45
Hdac3O88895 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Hdac3O88895 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hdac3O88895 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hdac3O88895 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hdac3O88895 Golph3-202ENSMUST00000226517 2359 ntBASIC17.89■□□□□ 0.45
Hdac3O88895 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hdac3O88895 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Hdac3O88895 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 69.9 ms