Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Hcn3O88705 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Hcn3O88705 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Hcn3O88705 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.33■□□□□ 0.68
Hcn3O88705 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hcn3O88705 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hcn3O88705 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC19.33■□□□□ 0.68
Hcn3O88705 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Hcn3O88705 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Hcn3O88705 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Hcn3O88705 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hcn3O88705 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Hcn3O88705 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hcn3O88705 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hcn3O88705 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.32■□□□□ 0.68
Hcn3O88705 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hcn3O88705 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hcn3O88705 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.32■□□□□ 0.68
Hcn3O88705 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hcn3O88705 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Hcn3O88705 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hcn3O88705 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Hcn3O88705 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Hcn3O88705 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hcn3O88705 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hcn3O88705 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Hcn3O88705 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hcn3O88705 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Hcn3O88705 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hcn3O88705 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hcn3O88705 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.31■□□□□ 0.68
Hcn3O88705 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hcn3O88705 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hcn3O88705 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hcn3O88705 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hcn3O88705 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hcn3O88705 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hcn3O88705 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.3■□□□□ 0.68
Hcn3O88705 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hcn3O88705 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Hcn3O88705 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hcn3O88705 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hcn3O88705 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hcn3O88705 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Hcn3O88705 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Hcn3O88705 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hcn3O88705 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Hcn3O88705 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hcn3O88705 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hcn3O88705 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Hcn3O88705 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Hcn3O88705 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.29■□□□□ 0.68
Hcn3O88705 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hcn3O88705 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Hcn3O88705 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
Hcn3O88705 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hcn3O88705 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Hcn3O88705 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.28■□□□□ 0.68
Hcn3O88705 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hcn3O88705 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hcn3O88705 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Hcn3O88705 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hcn3O88705 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hcn3O88705 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.27■□□□□ 0.68
Hcn3O88705 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Hcn3O88705 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Hcn3O88705 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Hcn3O88705 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.27■□□□□ 0.68
Hcn3O88705 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Hcn3O88705 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Hcn3O88705 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.27■□□□□ 0.67
Hcn3O88705 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
Hcn3O88705 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hcn3O88705 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hcn3O88705 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Hcn3O88705 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hcn3O88705 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hcn3O88705 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Hcn3O88705 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.26■□□□□ 0.67
Hcn3O88705 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Hcn3O88705 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Hcn3O88705 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hcn3O88705 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Hcn3O88705 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.25■□□□□ 0.67
Hcn3O88705 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hcn3O88705 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hcn3O88705 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hcn3O88705 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hcn3O88705 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hcn3O88705 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.25■□□□□ 0.67
Hcn3O88705 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hcn3O88705 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Hcn3O88705 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Hcn3O88705 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hcn3O88705 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Hcn3O88705 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hcn3O88705 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hcn3O88705 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Hcn3O88705 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC19.24■□□□□ 0.67
Hcn3O88705 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms