Protein–RNA interactions for Protein: O70477

Pknox1, Homeobox protein PKNOX1, mousemouse

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pknox1O70477 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Pknox1O70477 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Pknox1O70477 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pknox1O70477 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC20.06■□□□□ 0.8
Pknox1O70477 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pknox1O70477 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.06■□□□□ 0.8
Pknox1O70477 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pknox1O70477 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pknox1O70477 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pknox1O70477 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Pknox1O70477 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pknox1O70477 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Pknox1O70477 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pknox1O70477 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pknox1O70477 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Pknox1O70477 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pknox1O70477 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pknox1O70477 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.05■□□□□ 0.8
Pknox1O70477 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pknox1O70477 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pknox1O70477 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pknox1O70477 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pknox1O70477 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Pknox1O70477 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.05■□□□□ 0.8
Pknox1O70477 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pknox1O70477 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
Pknox1O70477 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pknox1O70477 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
Pknox1O70477 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Pknox1O70477 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
Pknox1O70477 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.05■□□□□ 0.8
Pknox1O70477 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
Pknox1O70477 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Pknox1O70477 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Pknox1O70477 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pknox1O70477 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.04■□□□□ 0.8
Pknox1O70477 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pknox1O70477 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Pknox1O70477 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.04■□□□□ 0.8
Pknox1O70477 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pknox1O70477 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Pknox1O70477 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pknox1O70477 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pknox1O70477 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pknox1O70477 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Pknox1O70477 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pknox1O70477 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pknox1O70477 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pknox1O70477 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pknox1O70477 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Pknox1O70477 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pknox1O70477 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pknox1O70477 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pknox1O70477 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Pknox1O70477 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pknox1O70477 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Pknox1O70477 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pknox1O70477 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pknox1O70477 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pknox1O70477 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Pknox1O70477 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pknox1O70477 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Pknox1O70477 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pknox1O70477 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pknox1O70477 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pknox1O70477 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pknox1O70477 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.01■□□□□ 0.79
Pknox1O70477 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.01■□□□□ 0.79
Pknox1O70477 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.01■□□□□ 0.79
Pknox1O70477 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pknox1O70477 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.01■□□□□ 0.79
Pknox1O70477 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pknox1O70477 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.01■□□□□ 0.79
Pknox1O70477 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pknox1O70477 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pknox1O70477 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.01■□□□□ 0.79
Pknox1O70477 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Pknox1O70477 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pknox1O70477 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Pknox1O70477 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pknox1O70477 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pknox1O70477 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20■□□□□ 0.79
Pknox1O70477 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20■□□□□ 0.79
Pknox1O70477 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pknox1O70477 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Pknox1O70477 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20■□□□□ 0.79
Pknox1O70477 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pknox1O70477 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Pknox1O70477 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.99■□□□□ 0.79
Pknox1O70477 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pknox1O70477 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pknox1O70477 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Pknox1O70477 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pknox1O70477 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pknox1O70477 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pknox1O70477 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pknox1O70477 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.99■□□□□ 0.79
Pknox1O70477 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pknox1O70477 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pknox1O70477 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms