Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
SncaO55042 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
SncaO55042 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC16.68■□□□□ 0.26
SncaO55042 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SncaO55042 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SncaO55042 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SncaO55042 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SncaO55042 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SncaO55042 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
SncaO55042 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
SncaO55042 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SncaO55042 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
SncaO55042 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SncaO55042 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SncaO55042 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
SncaO55042 Gm4430-201ENSMUST00000192413 1943 ntBASIC16.67■□□□□ 0.26
SncaO55042 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.67■□□□□ 0.26
SncaO55042 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SncaO55042 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SncaO55042 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
SncaO55042 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC16.67■□□□□ 0.26
SncaO55042 AC122428.2-201ENSMUST00000216321 1832 ntBASIC16.67■□□□□ 0.26
SncaO55042 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SncaO55042 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SncaO55042 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SncaO55042 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SncaO55042 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SncaO55042 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SncaO55042 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.66■□□□□ 0.26
SncaO55042 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
SncaO55042 Nsd1-203ENSMUST00000224156 1149 ntBASIC16.66■□□□□ 0.26
SncaO55042 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SncaO55042 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SncaO55042 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SncaO55042 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SncaO55042 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SncaO55042 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SncaO55042 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
SncaO55042 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SncaO55042 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SncaO55042 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SncaO55042 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC16.65■□□□□ 0.26
SncaO55042 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC16.65■□□□□ 0.26
SncaO55042 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SncaO55042 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
SncaO55042 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
SncaO55042 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SncaO55042 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SncaO55042 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SncaO55042 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SncaO55042 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SncaO55042 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
SncaO55042 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC16.64■□□□□ 0.25
SncaO55042 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC16.64■□□□□ 0.25
SncaO55042 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SncaO55042 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SncaO55042 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SncaO55042 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SncaO55042 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SncaO55042 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SncaO55042 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SncaO55042 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
SncaO55042 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SncaO55042 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SncaO55042 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SncaO55042 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SncaO55042 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SncaO55042 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
SncaO55042 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC16.63■□□□□ 0.25
SncaO55042 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC16.63■□□□□ 0.25
SncaO55042 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SncaO55042 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SncaO55042 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
SncaO55042 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
SncaO55042 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
SncaO55042 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SncaO55042 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SncaO55042 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SncaO55042 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SncaO55042 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
SncaO55042 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SncaO55042 Gm45444-201ENSMUST00000211394 898 ntBASIC16.62■□□□□ 0.25
SncaO55042 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC16.62■□□□□ 0.25
SncaO55042 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SncaO55042 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC16.62■□□□□ 0.25
SncaO55042 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SncaO55042 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
SncaO55042 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SncaO55042 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
SncaO55042 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SncaO55042 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SncaO55042 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SncaO55042 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SncaO55042 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SncaO55042 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SncaO55042 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SncaO55042 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SncaO55042 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SncaO55042 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SncaO55042 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 17.1 ms