Protein–RNA interactions for Protein: O55038

Cxcl13, C-X-C motif chemokine 13, mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl13O55038 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cxcl13O55038 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cxcl13O55038 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cxcl13O55038 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cxcl13O55038 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Cxcl13O55038 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cxcl13O55038 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cxcl13O55038 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
Cxcl13O55038 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cxcl13O55038 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cxcl13O55038 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cxcl13O55038 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cxcl13O55038 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cxcl13O55038 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cxcl13O55038 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cxcl13O55038 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Cxcl13O55038 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cxcl13O55038 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cxcl13O55038 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cxcl13O55038 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cxcl13O55038 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cxcl13O55038 Gm32051-202ENSMUST00000197905 2385 ntBASIC17.15■□□□□ 0.34
Cxcl13O55038 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cxcl13O55038 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cxcl13O55038 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cxcl13O55038 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cxcl13O55038 AC122428.2-201ENSMUST00000216321 1832 ntBASIC17.15■□□□□ 0.34
Cxcl13O55038 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cxcl13O55038 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cxcl13O55038 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
Cxcl13O55038 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cxcl13O55038 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Cxcl13O55038 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Cxcl13O55038 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cxcl13O55038 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cxcl13O55038 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cxcl13O55038 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cxcl13O55038 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.14■□□□□ 0.33
Cxcl13O55038 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Cxcl13O55038 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cxcl13O55038 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cxcl13O55038 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cxcl13O55038 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC17.14■□□□□ 0.33
Cxcl13O55038 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cxcl13O55038 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.14■□□□□ 0.33
Cxcl13O55038 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
Cxcl13O55038 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cxcl13O55038 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cxcl13O55038 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cxcl13O55038 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Cxcl13O55038 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cxcl13O55038 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cxcl13O55038 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cxcl13O55038 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC17.13■□□□□ 0.33
Cxcl13O55038 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cxcl13O55038 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.13■□□□□ 0.33
Cxcl13O55038 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cxcl13O55038 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cxcl13O55038 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Cxcl13O55038 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cxcl13O55038 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC17.13■□□□□ 0.33
Cxcl13O55038 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cxcl13O55038 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cxcl13O55038 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cxcl13O55038 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cxcl13O55038 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cxcl13O55038 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cxcl13O55038 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Cxcl13O55038 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Cxcl13O55038 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC17.12■□□□□ 0.33
Cxcl13O55038 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cxcl13O55038 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cxcl13O55038 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Cxcl13O55038 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cxcl13O55038 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cxcl13O55038 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cxcl13O55038 Mir6236-201ENSMUST00000184437 123 ntBASIC17.11■□□□□ 0.33
Cxcl13O55038 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cxcl13O55038 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC17.11■□□□□ 0.33
Cxcl13O55038 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Cxcl13O55038 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cxcl13O55038 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cxcl13O55038 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cxcl13O55038 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cxcl13O55038 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Cxcl13O55038 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
Cxcl13O55038 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Cxcl13O55038 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cxcl13O55038 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cxcl13O55038 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.1■□□□□ 0.33
Cxcl13O55038 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Cxcl13O55038 Gm26833-201ENSMUST00000180899 440 ntBASIC17.1■□□□□ 0.33
Cxcl13O55038 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC17.1■□□□□ 0.33
Cxcl13O55038 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC17.1■□□□□ 0.33
Cxcl13O55038 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cxcl13O55038 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Cxcl13O55038 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.1■□□□□ 0.33
Cxcl13O55038 Gm17641-201ENSMUST00000166328 2350 ntBASIC17.1■□□□□ 0.33
Cxcl13O55038 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.1■□□□□ 0.33
Cxcl13O55038 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms