Protein–RNA interactions for Protein: O54962

Banf1, Barrier-to-autointegration factor, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Banf1O54962 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Banf1O54962 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Banf1O54962 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Banf1O54962 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Banf1O54962 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Banf1O54962 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Banf1O54962 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Banf1O54962 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Banf1O54962 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Banf1O54962 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Banf1O54962 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Banf1O54962 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC20.61■□□□□ 0.89
Banf1O54962 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Banf1O54962 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Banf1O54962 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Banf1O54962 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
Banf1O54962 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Banf1O54962 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Banf1O54962 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Banf1O54962 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Banf1O54962 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Banf1O54962 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
Banf1O54962 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Banf1O54962 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
Banf1O54962 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Banf1O54962 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Banf1O54962 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Banf1O54962 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Banf1O54962 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Banf1O54962 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Banf1O54962 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Banf1O54962 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Banf1O54962 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Banf1O54962 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Banf1O54962 Gm43566-201ENSMUST00000196851 808 ntBASIC20.58■□□□□ 0.89
Banf1O54962 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Banf1O54962 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Banf1O54962 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.58■□□□□ 0.88
Banf1O54962 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Banf1O54962 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC20.58■□□□□ 0.88
Banf1O54962 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Banf1O54962 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Banf1O54962 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Banf1O54962 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Banf1O54962 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC20.57■□□□□ 0.88
Banf1O54962 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Banf1O54962 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Banf1O54962 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Banf1O54962 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Banf1O54962 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Banf1O54962 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Banf1O54962 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.56■□□□□ 0.88
Banf1O54962 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Banf1O54962 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC20.56■□□□□ 0.88
Banf1O54962 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Banf1O54962 Gm5921-201ENSMUST00000075898 882 ntBASIC20.56■□□□□ 0.88
Banf1O54962 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Banf1O54962 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Banf1O54962 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Banf1O54962 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Banf1O54962 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Banf1O54962 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Banf1O54962 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Banf1O54962 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Banf1O54962 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Banf1O54962 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Banf1O54962 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Banf1O54962 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Banf1O54962 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Banf1O54962 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.54■□□□□ 0.88
Banf1O54962 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Banf1O54962 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.54■□□□□ 0.88
Banf1O54962 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Banf1O54962 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Banf1O54962 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Banf1O54962 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.53■□□□□ 0.88
Banf1O54962 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.53■□□□□ 0.88
Banf1O54962 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.53■□□□□ 0.88
Banf1O54962 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Banf1O54962 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Banf1O54962 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Banf1O54962 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
Banf1O54962 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Banf1O54962 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Banf1O54962 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Banf1O54962 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Banf1O54962 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
Banf1O54962 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.52■□□□□ 0.88
Banf1O54962 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Banf1O54962 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.52■□□□□ 0.88
Banf1O54962 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Banf1O54962 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Banf1O54962 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Banf1O54962 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Banf1O54962 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Banf1O54962 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Banf1O54962 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Banf1O54962 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Banf1O54962 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Banf1O54962 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 59 ms