Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cldn5O54942 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cldn5O54942 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Cldn5O54942 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cldn5O54942 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.08■□□□□ 0.97
Cldn5O54942 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cldn5O54942 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cldn5O54942 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cldn5O54942 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.08■□□□□ 0.97
Cldn5O54942 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Cldn5O54942 Serp2-204ENSMUST00000228055 705 ntBASIC21.08■□□□□ 0.97
Cldn5O54942 Gm6139-201ENSMUST00000079261 882 ntBASIC21.08■□□□□ 0.97
Cldn5O54942 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Cldn5O54942 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cldn5O54942 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cldn5O54942 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Cldn5O54942 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.07■□□□□ 0.96
Cldn5O54942 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cldn5O54942 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cldn5O54942 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC21.06■□□□□ 0.96
Cldn5O54942 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cldn5O54942 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cldn5O54942 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC21.06■□□□□ 0.96
Cldn5O54942 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cldn5O54942 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cldn5O54942 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cldn5O54942 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cldn5O54942 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC21.05■□□□□ 0.96
Cldn5O54942 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cldn5O54942 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cldn5O54942 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cldn5O54942 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Cldn5O54942 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cldn5O54942 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC21.04■□□□□ 0.96
Cldn5O54942 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cldn5O54942 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cldn5O54942 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.04■□□□□ 0.96
Cldn5O54942 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.04■□□□□ 0.96
Cldn5O54942 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
Cldn5O54942 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.04■□□□□ 0.96
Cldn5O54942 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC21.04■□□□□ 0.96
Cldn5O54942 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cldn5O54942 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cldn5O54942 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cldn5O54942 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cldn5O54942 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cldn5O54942 Gm12251-201ENSMUST00000117893 792 ntBASIC21.03■□□□□ 0.96
Cldn5O54942 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
Cldn5O54942 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cldn5O54942 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cldn5O54942 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC21.02■□□□□ 0.96
Cldn5O54942 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cldn5O54942 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC21.02■□□□□ 0.96
Cldn5O54942 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.02■□□□□ 0.96
Cldn5O54942 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Cldn5O54942 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cldn5O54942 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Cldn5O54942 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Cldn5O54942 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Cldn5O54942 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Cldn5O54942 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cldn5O54942 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cldn5O54942 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Cldn5O54942 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cldn5O54942 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Cldn5O54942 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cldn5O54942 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cldn5O54942 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cldn5O54942 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
Cldn5O54942 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cldn5O54942 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cldn5O54942 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cldn5O54942 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cldn5O54942 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cldn5O54942 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cldn5O54942 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Cldn5O54942 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Cldn5O54942 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cldn5O54942 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cldn5O54942 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cldn5O54942 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cldn5O54942 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.98■□□□□ 0.95
Cldn5O54942 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Cldn5O54942 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Cldn5O54942 Gm8493-201ENSMUST00000196881 489 ntBASIC20.98■□□□□ 0.95
Cldn5O54942 Gm43017-201ENSMUST00000198296 752 ntBASIC20.98■□□□□ 0.95
Cldn5O54942 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cldn5O54942 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cldn5O54942 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cldn5O54942 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Cldn5O54942 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cldn5O54942 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cldn5O54942 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cldn5O54942 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cldn5O54942 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.97■□□□□ 0.95
Cldn5O54942 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cldn5O54942 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.97■□□□□ 0.95
Cldn5O54942 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Cldn5O54942 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Cldn5O54942 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms