Protein–RNA interactions for Protein: O08852

Pkd1, Polycystin-1, mousemouse

Predictions only

Length 4,293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1O08852 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC13.13□□□□□ -0.31
Pkd1O08852 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC13.13□□□□□ -0.31
Pkd1O08852 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC13.13□□□□□ -0.31
Pkd1O08852 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pkd1O08852 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pkd1O08852 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pkd1O08852 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pkd1O08852 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pkd1O08852 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Pkd1O08852 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pkd1O08852 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Pkd1O08852 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Pkd1O08852 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC13.12□□□□□ -0.31
Pkd1O08852 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pkd1O08852 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pkd1O08852 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
Pkd1O08852 Gm42778-201ENSMUST00000199644 553 ntBASIC13.11□□□□□ -0.31
Pkd1O08852 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
Pkd1O08852 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC13.11□□□□□ -0.31
Pkd1O08852 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pkd1O08852 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC13.11□□□□□ -0.31
Pkd1O08852 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC13.11□□□□□ -0.31
Pkd1O08852 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Pkd1O08852 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pkd1O08852 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pkd1O08852 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pkd1O08852 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC13.11□□□□□ -0.31
Pkd1O08852 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pkd1O08852 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC13.11□□□□□ -0.31
Pkd1O08852 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pkd1O08852 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC13.11□□□□□ -0.31
Pkd1O08852 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pkd1O08852 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Pkd1O08852 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC13.1□□□□□ -0.31
Pkd1O08852 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Pkd1O08852 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pkd1O08852 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pkd1O08852 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pkd1O08852 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pkd1O08852 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pkd1O08852 Gm22240-201ENSMUST00000175225 82 ntBASIC13.1□□□□□ -0.31
Pkd1O08852 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Pkd1O08852 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pkd1O08852 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pkd1O08852 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pkd1O08852 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pkd1O08852 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pkd1O08852 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Pkd1O08852 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pkd1O08852 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pkd1O08852 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Pkd1O08852 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Pkd1O08852 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pkd1O08852 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pkd1O08852 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pkd1O08852 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pkd1O08852 Gm13234-201ENSMUST00000120010 747 ntBASIC13.09□□□□□ -0.31
Pkd1O08852 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pkd1O08852 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pkd1O08852 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC13.09□□□□□ -0.31
Pkd1O08852 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pkd1O08852 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pkd1O08852 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pkd1O08852 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Pkd1O08852 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pkd1O08852 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC13.08□□□□□ -0.32
Pkd1O08852 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pkd1O08852 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pkd1O08852 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pkd1O08852 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pkd1O08852 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pkd1O08852 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pkd1O08852 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Pkd1O08852 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC13.08□□□□□ -0.32
Pkd1O08852 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Pkd1O08852 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pkd1O08852 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Pkd1O08852 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC13.07□□□□□ -0.32
Pkd1O08852 Gm7514-201ENSMUST00000209475 934 ntBASIC13.07□□□□□ -0.32
Pkd1O08852 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Pkd1O08852 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pkd1O08852 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pkd1O08852 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pkd1O08852 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC13.07□□□□□ -0.32
Pkd1O08852 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pkd1O08852 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pkd1O08852 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pkd1O08852 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pkd1O08852 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Pkd1O08852 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pkd1O08852 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Pkd1O08852 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pkd1O08852 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Pkd1O08852 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Pkd1O08852 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC13.06□□□□□ -0.32
Pkd1O08852 Ap3s1-204ENSMUST00000225520 957 ntBASIC13.06□□□□□ -0.32
Pkd1O08852 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Pkd1O08852 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pkd1O08852 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Pkd1O08852 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms