Protein–RNA interactions for Protein: O08811

Ercc2, General transcription and DNA repair factor IIH helicase subunit XPD, mousemouse

Known RBP Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc2O08811 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.74■□□□□ 0.91
Ercc2O08811 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ercc2O08811 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.74■□□□□ 0.91
Ercc2O08811 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ercc2O08811 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ercc2O08811 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Ercc2O08811 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ercc2O08811 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Ercc2O08811 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ercc2O08811 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ercc2O08811 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Ercc2O08811 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ercc2O08811 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ercc2O08811 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Ercc2O08811 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ercc2O08811 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ercc2O08811 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC20.73■□□□□ 0.91
Ercc2O08811 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ercc2O08811 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ercc2O08811 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
Ercc2O08811 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ercc2O08811 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Ercc2O08811 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ercc2O08811 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ercc2O08811 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Ercc2O08811 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ercc2O08811 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.72■□□□□ 0.91
Ercc2O08811 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Ercc2O08811 Gm43530-201ENSMUST00000195920 274 ntBASIC20.72■□□□□ 0.91
Ercc2O08811 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ercc2O08811 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ercc2O08811 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ercc2O08811 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ercc2O08811 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ercc2O08811 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.72■□□□□ 0.91
Ercc2O08811 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ercc2O08811 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ercc2O08811 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ercc2O08811 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ercc2O08811 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ercc2O08811 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ercc2O08811 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ercc2O08811 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Ercc2O08811 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ercc2O08811 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
Ercc2O08811 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ercc2O08811 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.7■□□□□ 0.9
Ercc2O08811 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.7■□□□□ 0.9
Ercc2O08811 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.7■□□□□ 0.9
Ercc2O08811 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ercc2O08811 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ercc2O08811 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ercc2O08811 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ercc2O08811 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC20.69■□□□□ 0.9
Ercc2O08811 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.69■□□□□ 0.9
Ercc2O08811 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ercc2O08811 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ercc2O08811 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ercc2O08811 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Ercc2O08811 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ercc2O08811 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ercc2O08811 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Ercc2O08811 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.68■□□□□ 0.9
Ercc2O08811 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Ercc2O08811 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ercc2O08811 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.67■□□□□ 0.9
Ercc2O08811 Gm12922-201ENSMUST00000120626 809 ntBASIC20.67■□□□□ 0.9
Ercc2O08811 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.67■□□□□ 0.9
Ercc2O08811 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.67■□□□□ 0.9
Ercc2O08811 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ercc2O08811 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ercc2O08811 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Ercc2O08811 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Ercc2O08811 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ercc2O08811 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.66■□□□□ 0.9
Ercc2O08811 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ercc2O08811 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ercc2O08811 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ercc2O08811 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Ercc2O08811 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ercc2O08811 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ercc2O08811 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ercc2O08811 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Ercc2O08811 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
Ercc2O08811 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ercc2O08811 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ercc2O08811 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ercc2O08811 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ercc2O08811 Golgb1-201ENSMUST00000023534 498 ntBASIC20.64■□□□□ 0.89
Ercc2O08811 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ercc2O08811 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ercc2O08811 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ercc2O08811 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ercc2O08811 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ercc2O08811 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ercc2O08811 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ercc2O08811 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ercc2O08811 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.63■□□□□ 0.89
Ercc2O08811 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.63■□□□□ 0.89
Ercc2O08811 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms