Protein–RNA interactions for Protein: O08738

Casp6, Caspase-6, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casp6O08738 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Casp6O08738 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Casp6O08738 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC17.4■□□□□ 0.38
Casp6O08738 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Casp6O08738 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Casp6O08738 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC17.4■□□□□ 0.38
Casp6O08738 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC17.4■□□□□ 0.38
Casp6O08738 Gm42569-201ENSMUST00000200539 472 ntBASIC17.4■□□□□ 0.38
Casp6O08738 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC17.4■□□□□ 0.38
Casp6O08738 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Casp6O08738 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Casp6O08738 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Casp6O08738 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Casp6O08738 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Casp6O08738 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Casp6O08738 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
Casp6O08738 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.39■□□□□ 0.37
Casp6O08738 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC17.39■□□□□ 0.37
Casp6O08738 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Casp6O08738 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC17.39■□□□□ 0.37
Casp6O08738 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC17.39■□□□□ 0.37
Casp6O08738 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Casp6O08738 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Casp6O08738 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Casp6O08738 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.38■□□□□ 0.37
Casp6O08738 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.38■□□□□ 0.37
Casp6O08738 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.38■□□□□ 0.37
Casp6O08738 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.38■□□□□ 0.37
Casp6O08738 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Casp6O08738 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Casp6O08738 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Casp6O08738 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Casp6O08738 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Casp6O08738 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Casp6O08738 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Casp6O08738 Gm29257-201ENSMUST00000186115 639 ntBASIC17.37■□□□□ 0.37
Casp6O08738 Gm7291-201ENSMUST00000199147 382 ntBASIC17.37■□□□□ 0.37
Casp6O08738 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Casp6O08738 Gm40848-201ENSMUST00000221998 324 ntBASIC17.37■□□□□ 0.37
Casp6O08738 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Casp6O08738 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Casp6O08738 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.37■□□□□ 0.37
Casp6O08738 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Casp6O08738 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Casp6O08738 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Casp6O08738 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Casp6O08738 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Casp6O08738 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC17.36■□□□□ 0.37
Casp6O08738 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Casp6O08738 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Casp6O08738 Gm42642-201ENSMUST00000200683 355 ntBASIC17.36■□□□□ 0.37
Casp6O08738 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC17.36■□□□□ 0.37
Casp6O08738 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Casp6O08738 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Casp6O08738 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Casp6O08738 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Casp6O08738 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Casp6O08738 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Casp6O08738 AC164883.3-201ENSMUST00000227396 1774 ntBASIC17.35■□□□□ 0.37
Casp6O08738 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Casp6O08738 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Casp6O08738 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Casp6O08738 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Casp6O08738 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.35■□□□□ 0.37
Casp6O08738 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.35■□□□□ 0.37
Casp6O08738 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Casp6O08738 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Casp6O08738 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Casp6O08738 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.35■□□□□ 0.37
Casp6O08738 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Casp6O08738 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Casp6O08738 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Casp6O08738 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Casp6O08738 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Casp6O08738 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Casp6O08738 Gm18671-201ENSMUST00000214826 683 ntBASIC17.34■□□□□ 0.37
Casp6O08738 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC17.34■□□□□ 0.37
Casp6O08738 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Casp6O08738 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Casp6O08738 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Casp6O08738 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Casp6O08738 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
Casp6O08738 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
Casp6O08738 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Casp6O08738 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Casp6O08738 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.33■□□□□ 0.36
Casp6O08738 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.33■□□□□ 0.36
Casp6O08738 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC17.33■□□□□ 0.36
Casp6O08738 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Casp6O08738 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Casp6O08738 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Casp6O08738 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Casp6O08738 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Casp6O08738 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
Casp6O08738 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Casp6O08738 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Casp6O08738 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Casp6O08738 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Casp6O08738 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC17.32■□□□□ 0.36
Casp6O08738 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 18.1 ms