Protein–RNA interactions for Protein: O08665

Sema3a, Semaphorin-3A, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sema3aO08665 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sema3aO08665 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Sema3aO08665 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC20.45■□□□□ 0.86
Sema3aO08665 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sema3aO08665 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sema3aO08665 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Sema3aO08665 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Sema3aO08665 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.44■□□□□ 0.86
Sema3aO08665 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Sema3aO08665 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Sema3aO08665 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sema3aO08665 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sema3aO08665 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Sema3aO08665 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sema3aO08665 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sema3aO08665 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Sema3aO08665 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sema3aO08665 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sema3aO08665 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC20.43■□□□□ 0.86
Sema3aO08665 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC20.43■□□□□ 0.86
Sema3aO08665 Golgb1-201ENSMUST00000023534 498 ntBASIC20.43■□□□□ 0.86
Sema3aO08665 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sema3aO08665 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Sema3aO08665 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
Sema3aO08665 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.43■□□□□ 0.86
Sema3aO08665 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Sema3aO08665 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Sema3aO08665 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Sema3aO08665 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sema3aO08665 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC20.42■□□□□ 0.86
Sema3aO08665 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
Sema3aO08665 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.42■□□□□ 0.86
Sema3aO08665 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sema3aO08665 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Sema3aO08665 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sema3aO08665 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Sema3aO08665 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Sema3aO08665 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sema3aO08665 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sema3aO08665 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sema3aO08665 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sema3aO08665 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Sema3aO08665 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
Sema3aO08665 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Sema3aO08665 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sema3aO08665 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sema3aO08665 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Sema3aO08665 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Sema3aO08665 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sema3aO08665 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sema3aO08665 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sema3aO08665 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Sema3aO08665 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Sema3aO08665 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sema3aO08665 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sema3aO08665 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Sema3aO08665 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Sema3aO08665 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Sema3aO08665 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Sema3aO08665 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Sema3aO08665 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Sema3aO08665 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Sema3aO08665 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
Sema3aO08665 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sema3aO08665 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Sema3aO08665 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sema3aO08665 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sema3aO08665 Gm9847-201ENSMUST00000052528 599 ntBASIC20.39■□□□□ 0.85
Sema3aO08665 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sema3aO08665 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sema3aO08665 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Sema3aO08665 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Sema3aO08665 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Sema3aO08665 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sema3aO08665 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.38■□□□□ 0.85
Sema3aO08665 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sema3aO08665 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sema3aO08665 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Sema3aO08665 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Sema3aO08665 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Sema3aO08665 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Sema3aO08665 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sema3aO08665 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Sema3aO08665 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sema3aO08665 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
Sema3aO08665 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sema3aO08665 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sema3aO08665 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
Sema3aO08665 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sema3aO08665 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Sema3aO08665 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Sema3aO08665 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sema3aO08665 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sema3aO08665 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Sema3aO08665 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Sema3aO08665 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.36■□□□□ 0.85
Sema3aO08665 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Sema3aO08665 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Sema3aO08665 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Sema3aO08665 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms